Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(37)
  SAGE RsaI
(0)
  SAGE Sau3A
(2)
  MPSS
(0)
  GeneChip
(6,782)
  Tiling Array
(313)
  cDNA Array
(3,714)
  Oligo Array
(7,645)
  Bead Array
(1,151)
  Protein Array
(5)
  Antibody
(0)
  RT-PCR
(43)
  HT-Seq
(1,197)
  Other
(79)
  All
(20,968)
 
  brain
(433)
  blood
(4,564)
  connective
(1,424)
  reproductive
(1,396)
  muscular
(2,644)
  digestive
(865)
  liver
(1,746)
  lung
(635)
  urinary
(133)
  endo/exo-crine
(1,124)
  embryo
(877)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(628)
  unclassified
(4,499)
  all
(20,968)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM957058 pancreas 0 BGI-Shenzhen, Shenzhen 518083, China 2012-07-06 [HT Sequencing] Illumina HiSeq 2000 (Tupaia chinensis) (GPL15772) SRA Tupaia chinensis
Tupaia chinensis
pancreas pancreas
2 GSM897233 Breast milk exosomes 28d 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 28d
3 GSM897232 Breast milk exosomes 21d 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 21d
4 GSM897231 Breast milk exosomes 14d 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 14d
5 GSM897230 Breast milk exosomes 7d 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 7d
6 GSM897229 Breast milk exosomes 3d 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 3d
7 GSM897228 Breast milk exosomes 0d-rep3 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 0d-rep3
8 GSM897227 Breast milk exosomes 0d-rep2 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 0d-rep2
9 GSM897226 Breast milk exosomes 0d-rep1 0 Sichuan Agricultural University 2012-03-17 [HT Sequencing] Illumina Genome Analyzer II (Sus scrofa) (GPL10945) SRA Sus scrofa
Sus scrofa domestica
breast Breast milk exosomes 0d-rep1
10 GSM840645 healthy vs coagulase - negative Staphylococci 16 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
11 GSM840644 coagulase - negative Staphylococci vs healthy 15 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
12 GSM840643 healthy vs coagulase - negative Staphylococci 14 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
13 GSM840642 coagulase - negative Staphylococci vs healthy 13 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
14 GSM840641 healthy vs coagulase - negative Staphylococci 12 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
15 GSM840640 coagulase - negative Staphylococci vs healthy 11 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
16 GSM840639 healthy vs coagulase - negative Staphylococci 10 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
17 GSM840638 coagulase - negative Staphylococci vs healthy 9 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
18 GSM840637 healthy vs coagulase - positive Staphylococci 8 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
19 GSM840636 coagulase - positive Staphylococci vs healthy 7 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
20 GSM840635 healthy vs coagulase - positive Staphylococci 6 45,220 Institite of Genetics and Animal Breeding, Polish Academy of Sciences 2011-11-29 [Oligo Array] Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version) (GPL11648) RNA Bos taurus
Bos taurus
breast quarter of mammary gland
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