Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(37)		   SAGE RsaI
(0)		   SAGE Sau3A
(2)		   MPSS
(0)		   GeneChip
(5,399)		   Tiling Array
(224)		   cDNA Array
(3,563)		   Oligo Array
(6,252)		   Bead Array
(559)		   Protein Array
(5)		   Antibody
(0)		   RT-PCR
(43)		   HT-Seq
(838)		   Other
(7)		   All
(16,929)		  
  brain
(47)		   blood
(465)		   connective
(335)		   reproductive
(304)		   muscular
(412)		   digestive
(107)		   liver
(516)		   lung
(113)		   urinary
(37)		   endo/exo-crine
(124)		   embryo
(362)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(81)		   unclassified
(660)		   all
(3,563)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM110563 Thyroid gland, RNA batch 2, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 thyroid/parathyroid Thyroid gland, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
2 GSM110538 Thyroid gland, RNA batch 1, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 thyroid/parathyroid Thyroid gland, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
3 GSM3869 Reference vs. Reference (2) 3,888 Michigan State University 2003-02-07 [cDNA Array] BMAM microarray (GPL245) RNA Bos taurus
Bos taurus		 breast Determing the false-postive rate on the BMAM microarray. (GAPDH was not added to the BMAM microarray for this experiment) Keywords = false positive, EST, microarray, mammary, bovine, cDNA
4 GSM3868 Reference vs. Reference (1) 3,888 Michigan State University 2003-02-07 [cDNA Array] BMAM microarray (GPL245) RNA Bos taurus
Bos taurus		 breast Determing the false-postive rate on the BMAM microarray. (GAPDH was not added to the BMAM microarray for this experiment) Keywords = false positive, EST, microarray, mammary, bovine, cDNA
5 GSM3867 Pre-pubertal mammary gland vs. post-pubertal mammary gland 3,888 Michigan State University 2003-02-07 [cDNA Array] BMAM microarray (GPL245) RNA Bos taurus
Bos taurus		 breast pre-pubertal mammary gland (136kg. Holstein heifer ) post-pubertal mammary gland (310kg. Holstein heifer)
6 GSM3865 Pre-pubertal mammary gland vs. lactating mammary gland 3,888 Michigan State University 2003-02-07 [cDNA Array] BMAM microarray (GPL245) RNA Bos taurus
Bos taurus		 breast lactating mammary gland pre-pubertal mammary gland (136kg. Holstein heifer)
7 GSM3866 Pre-pubertal mammary gland vs. lactating mammary gland 3,888 Michigan State University 2003-02-07 [cDNA Array] BMAM microarray (GPL245) RNA Bos taurus
Bos taurus		 breast lactating mammary gland pre-pubertal mammary gland (227kg. Holstein heifer)
8 GSM110557 Pituitary gland, RNA batch 2, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 pituitary Pituitary gland, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
9 GSM110547 Pituitary gland, RNA batch 1, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 pituitary Pituitary gland, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
10 GSM110559 Pancreas, RNA batch 2, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 pancreas Pancreas, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
11 GSM110564 Pancreas, RNA batch 1, Endocrine tissue, Porcine, 5 Hampshire boars, Healthy, 5 months old 55,488 Aarhus University 2006-05-24 [cDNA Array] DIAS_PIG_55K3_v1 (GPL3608) RNA Sus scrofa
Sus scrofa domestica		 pancreas Pancreas, Endocrine tissue, Porcine, Healthy Reference, Reference tissue, Porcine, Healthy
12 GSM291294 P114-slide9_normal 20,736 AgResearch NZ 2008-05-27 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
13 GSM291337 P114-slide9_low 20,736 AgResearch NZ 2008-05-28 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
14 GSM291288 P114-slide8_normal 20,736 AgResearch NZ 2008-05-27 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
15 GSM291336 P114-slide8_low 20,736 AgResearch NZ 2008-05-28 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
16 GSM291285 P114-slide7_normal 20,736 AgResearch NZ 2008-05-27 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
17 GSM291357 P114-slide7_low 20,736 AgResearch NZ 2008-05-28 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
18 GSM291282 P114-slide6_normal 20,736 AgResearch NZ 2008-05-27 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
19 GSM291333 P114-slide6_low 20,736 AgResearch NZ 2008-05-28 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue Mammary gland tissue
20 GSM291145 P114-slide5_normal 20,736 AgResearch NZ 2008-05-27 [cDNA Array] AgResearch Bos taurus Clone Array Print 114 (GPL6497) RNA Bos taurus
Bos taurus		 breast Mammary gland tissue
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