Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,985)
  Primates
(80)
  Rodents
(1,907)
  Mammals
(359)
  Vertebrates
(450)
  Invertebrates
(1,139)
  Plants
(2,490)
  Bacteria
(1,901)
  Viruses
(90)
  Phages
(11)
  Unclassified
(542)
  All
(13,032)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(5)
  Oligo Array
(1)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(5)
  Other
(0)
  All
(11)
 
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL2744 Streptococcus thermophilus bacteriophage microarray #2 279 Université Laval 2005-08-10 Custom made array Streptococcus phage DT1,Streptococcus phage 2972
Streptococcus phage DT1,Streptococcus phage 2972
cDNA Array spotted DNA/cDNA, Streptococcus thermophilus bacteriophage microarray #2,
2 GPL1939 Streptococcus thermophilus bacteriophage microarray 279 Université Laval 2005-03-31 Streptococcus phage DT1,Streptococcus phage 2972
Streptococcus phage DT1,Streptococcus phage 2972
cDNA Array spotted DNA/cDNA, Streptococcus thermophilus bacteriophage microarray, Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection.
3 GPL10654 Ralstonia phage RSL1 Array 1,104 Filgen,Inc. 2010-07-08 Combimatrix Ralstonia phage RSL1
Ralstonia phage RSL1
Oligo Array in situ oligonucleotide, Ralstonia phage RSL1 Array,
4 GPL17610 PacBio RS (Pseudomonas phage PaP1) 0 2013-08-22 Pseudomonas phage PaP1
Pseudomonas phage PaP1
HT Sequencing high-throughput sequencing, PacBio RS (Pseudomonas phage PaP1),
5 GPL4193 KLMBR Bacteriophage 40k V1.0 276 Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration,China 2006-08-21 CapitalBio Corporation Geobacillus virus E2
Geobacillus virus E2
cDNA Array spotted DNA/cDNA, KLMBR Bacteriophage 40k V1.0,
6 GPL3063 Integrated Genomics Bacteriophage T4 2K Genome Array 271 Integrated Genomics, Inc. 2005-11-09 Integrated Genomics Enterobacteria phage T4
Enterobacteria phage T4
cDNA Array spotted DNA/cDNA, Integrated Genomics Bacteriophage T4 2K Genome Array, PCR products representing T4 ORFs were spotted onto amino-silane coated glass slides from Corning (Corning, NY) using a Flexys Arrayer manufactured by Genomic Solutions, Inc. (Ann Arbor, MI). Each T4 ORF was spotted four times per slide as shown in the Supplementary file GPL3063_completeLayout.txt.
7 GPL16491 Illumina HiSeq 2000 (Mycobacterium phage Giles) 0 2013-01-10 Mycobacterium phage Giles
Mycobacterium phage Giles
HT Sequencing high-throughput sequencing, Illumina HiSeq 2000 (Mycobacterium phage Giles),
8 GPL17527 Illumina HiSeq 2000 (Enterobacteria phage lambda) 0 2013-08-02 Enterobacteria phage lambda
Enterobacteria phage lambda
HT Sequencing high-throughput sequencing, Illumina HiSeq 2000 (Enterobacteria phage lambda),
9 GPL17561 Illumina Genome Analyzer IIx (Enterobacterio phage MS2) 0 2013-08-12 Enterobacterio phage MS2
Enterobacterio phage MS2
HT Sequencing high-throughput sequencing, Illumina Genome Analyzer IIx (Enterobacterio phage MS2),
10 GPL15004 Illumina Genome Analyzer IIx (Enterobacteria phage lambda) 0 2011-12-13 Enterobacteria phage lambda
Enterobacteria phage lambda
HT Sequencing high-throughput sequencing, Illumina Genome Analyzer IIx (Enterobacteria phage lambda),
11 GPL2741 BFK 20 DNA microarray 268 Institute of Molecular Biology SAS 2005-08-10 Institute of Molecular Biology SAS Corynebacterium phage BFK20
Corynebacterium phage BFK20
cDNA Array spotted DNA/cDNA, BFK 20 DNA microarray,