Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(101)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(11)
  Other
(0)
  All
(112)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(112)
  all
(112)
 
1   |   2   |   3   |   4   |   5      »      [6]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1062377 Mycobacterium smegmatis infected with mycobacteriophage Giles for 30min 0 University of Pittsburgh 2013-01-10 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium phage Giles) (GPL16491) SRA Mycobacterium phage Giles
Mycobacterium phage Giles
unclassified source_name:30min post infection title:Mycobacterium smegmatis infected with mycobacteriophage Giles for 30min
2 GSM1062378 Mycobacterium smegmatis infected with mycobacteriophage Giles for 2.5hrs 0 University of Pittsburgh 2013-01-10 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium phage Giles) (GPL16491) SRA Mycobacterium phage Giles
Mycobacterium phage Giles
unclassified source_name:2.5hr post infection title:Mycobacterium smegmatis infected with mycobacteriophage Giles for 2.5hrs
3 GSM1062379 Mycobacteirophage Giles lysogen in Mycobacterium smegmatis 0 University of Pittsburgh 2013-01-10 [HT Sequencing] Illumina HiSeq 2000 (Mycobacterium phage Giles) (GPL16491) SRA Mycobacterium phage Giles
Mycobacterium phage Giles
unclassified source_name:Giles lysogen title:Mycobacteirophage Giles lysogen in Mycobacterium smegmatis
4 GSM47077 Phage DT1-3rd exp-0min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 0 min post infection title:Phage DT1-3rd exp-0min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
5 GSM47078 Phage DT1-3rd exp-2 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 2 min post infection title:Phage DT1-3rd exp-2 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
6 GSM47079 Phage DT1-3rd exp-7 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 7 min post infection title:Phage DT1-3rd exp-7 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
7 GSM47080 Phage DT1-3rd exp-12 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 12 min post infection title:Phage DT1-3rd exp-12 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
8 GSM47081 Phage DT1-3rd exp-17 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 17 min post infection title:Phage DT1-3rd exp-17 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
9 GSM47082 Phage DT1-3rd exp-22 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 22 min post infection title:Phage DT1-3rd exp-22 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
10 GSM47083 Phage DT1-3rd exp-27 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 27 min post infection title:Phage DT1-3rd exp-27 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
11 GSM47084 Phage DT1-3rd exp-32 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 32 min post infection title:Phage DT1-3rd exp-32 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
12 GSM47085 Phage DT1-3rd exp-37 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage DT1
Streptococcus phage DT1
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 37 min post infection title:Phage DT1-3rd exp-37 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
13 GSM47086 Phage 2972-2nd exp-0 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 2 min post infection title:Phage 2972-2nd exp-0 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
14 GSM47087 Phage 2972-2nd exp-2 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 2 min post infection title:Phage 2972-2nd exp-2 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
15 GSM47088 Phage 2972-2nd exp-7 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 7 min post infection title:Phage 2972-2nd exp-7 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
16 GSM47089 Phage 2972-2nd exp-12 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 12 min post infection title:Phage 2972-2nd exp-12 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
17 GSM47090 Phage 2972-2nd exp-17 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 17 min post infection title:Phage 2972-2nd exp-17 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
18 GSM47091 Phage 2972-2nd exp-22 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 22 min post infection title:Phage 2972-2nd exp-22 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
19 GSM47092 Phage 2972-2nd exp-27 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 27 min post infection title:Phage 2972-2nd exp-27 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
20 GSM47093 Phage 2972-2nd exp-32 min 279 Université Laval 2005-04-03 [cDNA Array] Streptococcus thermophilus bacteriophage microarray (GPL1939) RNA Streptococcus phage 2972
Streptococcus phage 2972
unclassified source_name:Streptococcus thermophilus non-infected cell sample Streptococcus thermophilus infected cell sample at 32 min post infection title:Phage 2972-2nd exp-32 min description:Custom microarray developed to study the gene expression of two S. thermophilus phages (DT1 and 2972) during infection. Gene expression was measured at nine time intervals (0, 2, 7, 12, 17, 22, 27, 32, 37 minutes) during phage infection. Non infected sample were compared to the infected sample at a specific time point.
1   |   2   |   3   |   4   |   5      »      [6]