Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(806)
  Tiling Array
(260)
  cDNA Array
(1,292)
  Oligo Array
(981)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(90)
  Other
(0)
  All
(3,435)
 
  brain
(3)
  blood
(0)
  connective
(0)
  reproductive
(1)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(3)
  embryo
(0)
  adult aerial structure
(183)
  young aerial structure
(62)
  root
(50)
  meristem/growing tissue
(98)
  flower/sexual organ
(47)
  seed/fruit/grain
(16)
  pooled
(92)
  unclassified
(251)
  all
(806)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM412647 wildtype_mock-inoculated_rep1 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, mock-inoculated
2 GSM412648 wildtype_mock-inoculated_rep2 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, mock-inoculated
3 GSM412649 wildtype_mock-inoculated_rep3 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, mock-inoculated
4 GSM412650 WRKY23-overexpressor_mock-inoculated_rep1 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, mock-inoculated
5 GSM412651 WRKY23-overexpressor_mock-inoculated_rep2 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, mock-inoculated
6 GSM412652 WRKY23-overexpressor_mock-inoculated_rep3 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, mock-inoculated
7 GSM412653 wildtype_Mmt-inoculated_rep1 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
8 GSM412654 wildtype_Mmt-inoculated_rep2 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
9 GSM412655 wildtype_Mmt-inoculated_rep3 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
10 GSM412656 WRKY23-overexpressor_Mmt-inoculated_rep1 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, Mmt-inoculated
11 GSM412657 WRKY23-overexpressor_Mmt-inoculated_rep2 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, Mmt-inoculated
12 GSM412658 WRKY23-overexpressor_Mmt-inoculated_rep3 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-overexpressor leaf discs, Mmt-inoculated
13 GSM412659 wildtype_Mmt-inoculated_rep1_a 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
14 GSM412660 wildtype_Mmt-inoculated_rep2_a 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
15 GSM412661 wildtype_Mmt-inoculated_rep3_a 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf wildtype leaf discs, Mmt-inoculated
16 GSM412662 WRKY23-RNAi_Mmt-inoculated_rep1 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-RNAi leaf discs, Mmt-inoculated
17 GSM412663 WRKY23-RNAi_Mmt-inoculated_rep2 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-RNAi leaf discs, Mmt-inoculated
18 GSM412664 WRKY23-RNAi_Mmt-inoculated_rep3 61,413 Natural Resources Canada 2009-06-03 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
leaf WRKY23-RNAi leaf discs, Mmt-inoculated
19 GSM413776 BT1 with array type poplar from Affymetrix 61,413 INRA 2009-06-05 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
unclassified source_name:BT1 title:BT1 with array type poplar from Affymetrix description:none
20 GSM413777 AT1 with array type poplar from Affymetrix 61,413 INRA 2009-06-05 [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) RNA Populus tremula x Populus alba
Populus tremula x Populus alba
unclassified source_name:AT1 title:AT1 with array type poplar from Affymetrix description:none
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