Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(365)
  Primates
(4)
  Rodents
(305)
  Mammals
(19)
  Vertebrates
(21)
  Invertebrates
(59)
  Plants
(125)
  Bacteria
(66)
  Viruses
(3)
  Phages
(0)
  Unclassified
(11)
  All
(979)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(39)
  Tiling Array
(13)
  cDNA Array
(26)
  Oligo Array
(32)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(9)
  Other
(1)
  All
(125)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing (GSE11209) [HT Sequencing] Yale-Illumina-Yeast-RNA-Seq (GPL6750) Yale University 2008-04-17 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1
(0 x 1)
1 by_platform
by_series
2 A link between RNA metabolism and silencing affecting Arabidopsis development (GSE11070) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Salk-Institute 2008-04-04 Arabidopsis thaliana
Arabidopsis thaliana
6
(0 x 6)
6 by_platform
by_series
3 The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation: ChIP-seq data (GSE11657) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) University of Nebraska-Lincoln 2008-06-03 Arabidopsis thaliana
Arabidopsis thaliana
6
(0 x 6)
6 by_platform
by_series
4 The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation (GSE11658) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) University of Nebraska-Lincoln 2008-06-03 Arabidopsis thaliana
Arabidopsis thaliana
6
(0 x 6)
6 by_platform
by_series
5 Novel microRNA-target RNA pairs revealed by Parallel analysis of RNA ends (GSE11094) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Delaware Biotechnology Institute 2008-04-08 Arabidopsis thaliana
Arabidopsis thaliana
7
(0 x 7)
7 by_platform
by_series
6 Annotating Low Abundance and Transient RNAs in Yeast using Ultra High-throughput Sequencing (GSE11801) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
16
(0 x 16)
16 by_platform
by_series
7 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing (GSE11802) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
16
(0 x 16)
16 by_platform
by_series
8 A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains (GSE11014) [HT Sequencing] CSIRO-PI Oryza Sativa small RNA sequences 2007 (454 sequenced) (GPL6669) CSIRO Plant Industry 2008-04-01 Oryza sativa
Oryza sativa
398,616
(99,654 x 4)
1 1 2 by_platform
by_series
9 A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains (GSE11014) [HT Sequencing] CSIRO-PI Oryza Sativa small RNA sequences 2007 (Solexa sequenced) (GPL6670) CSIRO Plant Industry 2008-04-01 Oryza sativa
Oryza sativa
5,367,312
(2,683,656 x 2)
2 by_platform
by_series