Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(817)
  Primates
(5)
  Rodents
(479)
  Mammals
(31)
  Vertebrates
(116)
  Invertebrates
(1,092)
  Plants
(193)
  Bacteria
(87)
  Viruses
(2)
  Phages
(2)
  Unclassified
(7)
  All
(2,834)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(48)
  Tiling Array
(7)
  cDNA Array
(43)
  Oligo Array
(77)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(14)
  Other
(0)
  All
(193)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Myceliophthora thermophila) (GPL13172) Concordia University 2011-02-15 Myceliophthora thermophila
Myceliophthora thermophila
7
(0 x 7)
7 by_platform
by_series
2 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Thielavia terrestris) (GPL13173) Concordia University 2011-02-15 Thielavia terrestris
Thielavia terrestris
7
(0 x 7)
7 by_platform
by_series
3 Differentially regulated genes in TOR knockdown Arabidopsis lines (GSE42968) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) NRC-PBI 2012-12-17 Arabidopsis thaliana
Arabidopsis thaliana
6
(0 x 6)
6 by_platform
by_series
4 The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome (GSE13622) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces cerevisiae) (GPL9377) University of Toronto 2008-11-17 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
1 3 by_platform
by_series
5 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Chaetomium globosum) (GPL13174) Concordia University 2011-02-15 Chaetomium globosum
Chaetomium globosum
4
(0 x 4)
4 by_platform
by_series
6 Histone H3K4 Demethylation is Negatively Regulated by Histone H3 Acetylation in S. cerevisiae (GSE41424) [HT Sequencing] Illumina HiSeq 2000 (Saccharomyces cerevisiae) (GPL13821) UBC 2012-10-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
7 Gene profiling of TRA1 and tra1-L3733A (GSE18591) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces cerevisiae) (GPL9377) University of Western Ontario 2009-10-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
8 In depth sequencing of the siRNAs associated with peach latent mosaic viroid infection (GSE18764) [HT Sequencing] Illumina Genome Analyzer (Prunus persica) (GPL9487) Université de Sherbrooke 2009-10-27 Prunus persica
Prunus persica
1
(0 x 1)
1 by_platform
by_series
9 In depth sequencing of the siRNAs associated with peach latent mosaic viroid infection (GSE18764) [HT Sequencing] Illumina Genome Analyzer (Prunus persica var. nucipersica) (GPL9488) Université de Sherbrooke 2009-10-27 Prunus persica var. nucipersica
Prunus persica var. nucipersica
1
(0 x 1)
1 by_platform
by_series
10 Nucleosome positioning for 4 yeast species (GSE23577) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces cerevisiae) (GPL9377) University of Toronto 2010-08-11 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1
(0 x 1)
1 by_platform
by_series
11 Nucleosome positioning for 4 yeast species (GSE23577) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces bayanus) (GPL10782) University of Toronto 2010-08-11 Saccharomyces bayanus
Saccharomyces bayanus
1
(0 x 1)
1 by_platform
by_series
12 Nucleosome positioning for 4 yeast species (GSE23577) [HT Sequencing] Illumina Genome Analyzer II (Candida glabrata) (GPL10783) University of Toronto 2010-08-11 Candida glabrata
Candida glabrata
1
(0 x 1)
1 by_platform
by_series
13 Nucleosome positioning for 4 yeast species (GSE23577) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces kudriavzevii) (GPL10784) University of Toronto 2010-08-11 Saccharomyces kudriavzevii
Saccharomyces kudriavzevii
1
(0 x 1)
1 by_platform
by_series
14 Nucleosome repositioning-coupled expression divergence between species (GSE24356) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces bayanus) (GPL10782) University of Toronto 2010-09-24 Saccharomyces bayanus
Saccharomyces bayanus
1
(0 x 1)
1 by_platform
by_series