Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(971)
  Primates
(5)
  Rodents
(599)
  Mammals
(44)
  Vertebrates
(129)
  Invertebrates
(1,555)
  Plants
(229)
  Bacteria
(109)
  Viruses
(2)
  Phages
(2)
  Unclassified
(7)
  All
(3,654)
 
  SAGE NlaIII
(4)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(57)
  Tiling Array
(8)
  cDNA Array
(43)
  Oligo Array
(88)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(27)
  Other
(0)
  All
(229)
 
1   |   2      »      
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 The consequences of rapid mating system evolution in crucifer genomes (GSE45518) [HT Sequencing] Illumina HiSeq 2000 (Capsella grandiflora) (GPL16879) University of Toronto 2013-03-26 Capsella grandiflora
Capsella grandiflora
10
(0 x 10)
10 by_platform
by_series
2 The Capsella rubella genome and the genomic consequences of rapid mating system evolution (GSE45687) [HT Sequencing] Illumina HiSeq 2000 (Capsella grandiflora) (GPL16879) University of Toronto 2013-04-01 Capsella grandiflora
Capsella grandiflora
10
(0 x 10)
10 by_platform
by_series
3 RNA-Seq effectively monitors gene expression in Eutrema salsuginuem plants growing in an extreme natural habitat and in controlled growth cabinet conditions (GSE49378) [HT Sequencing] 454 GS FLX Titanium (Eutrema salsugineum) (GPL17514) McMaster University 2013-07-30 Eutrema salsugineum
Eutrema salsugineum
10
(0 x 10)
10 by_platform
by_series
4 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Myceliophthora thermophila) (GPL13172) Concordia University 2011-02-15 Myceliophthora thermophila
Myceliophthora thermophila
7
(0 x 7)
7 by_platform
by_series
5 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Thielavia terrestris) (GPL13173) Concordia University 2011-02-15 Thielavia terrestris
Thielavia terrestris
7
(0 x 7)
7 by_platform
by_series
6 Differentially regulated genes in TOR knockdown Arabidopsis lines (GSE42968) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) NRC-PBI 2012-12-17 Arabidopsis thaliana
Arabidopsis thaliana
6
(0 x 6)
6 by_platform
by_series
7 Expression profiling of Grosmannia clavigera (Gc) under various conditions (GSE43006) [HT Sequencing] Illumina Genome Analyzer II (Grosmannia clavigera) (GPL16394) University of British Columbia 2012-12-18 Grosmannia clavigera
Grosmannia clavigera
6
(0 x 6)
6 by_platform
by_series
8 Transcriptomic response to substrate and temperature in two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris, and a related mesophile, Chaetomium globosum (GSE27323) [HT Sequencing] Illumina Genome Analyzer II (Chaetomium globosum) (GPL13174) Concordia University 2011-02-15 Chaetomium globosum
Chaetomium globosum
4
(0 x 4)
4 by_platform
by_series
9 Histone H3K4 Demethylation is Negatively Regulated by Histone H3 Acetylation in S. cerevisiae (GSE41424) [HT Sequencing] Illumina HiSeq 2000 (Saccharomyces cerevisiae) (GPL13821) UBC 2012-10-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
10 Expression profiling of Grosmannia clavigera (Gc) under various conditions (GSE43006) [HT Sequencing] Illumina HiSeq 2000 (Grosmannia clavigera) (GPL16395) University of British Columbia 2012-12-18 Grosmannia clavigera
Grosmannia clavigera
4
(0 x 4)
4 by_platform
by_series
11 The consequences of rapid mating system evolution in crucifer genomes (GSE45518) [HT Sequencing] Illumina Genome Analyzer IIx (Capsella grandiflora) (GPL16877) University of Toronto 2013-03-26 Capsella grandiflora
Capsella grandiflora
4
(0 x 4)
3 1 by_platform
by_series
12 The consequences of rapid mating system evolution in crucifer genomes (GSE45518) [HT Sequencing] Illumina Genome Analyzer IIx (Capsella rubella) (GPL16878) University of Toronto 2013-03-26 Capsella rubella
Capsella rubella
4
(0 x 4)
1 3 by_platform
by_series
13 The Capsella rubella genome and the genomic consequences of rapid mating system evolution (GSE45687) [HT Sequencing] Illumina Genome Analyzer IIx (Capsella grandiflora) (GPL16877) University of Toronto 2013-04-01 Capsella grandiflora
Capsella grandiflora
4
(0 x 4)
3 1 by_platform
by_series
14 The Capsella rubella genome and the genomic consequences of rapid mating system evolution (GSE45687) [HT Sequencing] Illumina Genome Analyzer IIx (Capsella rubella) (GPL16878) University of Toronto 2013-04-01 Capsella rubella
Capsella rubella
4
(0 x 4)
1 3 by_platform
by_series
15 Gene profiling of TRA1 and tra1-L3733A (GSE18591) [HT Sequencing] Illumina Genome Analyzer II (Saccharomyces cerevisiae) (GPL9377) University of Western Ontario 2009-10-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
16 Understanding transcriptional changes associated with the transition to selfing in Arabidopsis thaliana by using outgroup data (GSE45676) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis lyrata) (GPL16940) University of Toronto 2013-04-01 Arabidopsis lyrata
Arabidopsis lyrata
2
(0 x 2)
2 by_platform
by_series
17 Understanding transcriptional changes associated with the transition to selfing in Arabidopsis thaliana (GSE45685) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) University of Toronto 2013-04-01 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
18 The Capsella rubella genome and the genomic consequences of rapid mating system evolution (GSE45687) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis lyrata) (GPL16940) University of Toronto 2013-04-01 Arabidopsis lyrata
Arabidopsis lyrata
2
(0 x 2)
2 by_platform
by_series
19 The Capsella rubella genome and the genomic consequences of rapid mating system evolution (GSE45687) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) University of Toronto 2013-04-01 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
20 In depth sequencing of the siRNAs associated with peach latent mosaic viroid infection (GSE18764) [HT Sequencing] Illumina Genome Analyzer (Prunus persica) (GPL9487) Université de Sherbrooke 2009-10-27 Prunus persica
Prunus persica
1
(0 x 1)
1 by_platform
by_series
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