Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(33)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(58)
  GeneChip
(1,932)
  Tiling Array
(758)
  cDNA Array
(1,617)
  Oligo Array
(2,013)
  Bead Array
(1)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(1,165)
  Other
(20)
  All
(7,611)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 RACK1 function in the miRNA pathway (GSE40579) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) ZMBP - University of Tuebingen 2012-09-04 Arabidopsis thaliana
Arabidopsis thaliana
4
(0 x 4)
4 by_platform
by_series
2 Magnesium Availability Regulates Development of Root Hairs in Arabidopsis thaliana (GSE42899) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) Zhejiang University 2012-12-13 Arabidopsis thaliana
Arabidopsis thaliana
5
(0 x 5)
5 by_platform
by_series
3 miRNA profiling in cytoplasmic male sterile (CMS) and its maintainer fertile (MF) lines of Brassica juncea by deep sequencing (GSE43244) [HT Sequencing] Illumina Genome Analyzer IIx (Brassica juncea) (GPL16439) Zhejiang University 2013-01-02 Brassica juncea
Brassica juncea
4
(0 x 4)
4 by_platform
by_series
4 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication [small RNA] (GSE39308) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
3
(0 x 3)
1 2 by_platform
by_series
5 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication (GSE39309) [HT Sequencing] Illumina HiSeq 2000 (Oryza rufipogon) (GPL15800) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
3
(0 x 3)
1 2 by_platform
by_series
6 Bbssk1 dependent gene expression in Beauveria bassiana (GSE40229) [HT Sequencing] Illumina HiSeq 2000 (Beauveria bassiana ARSEF 2860) (GPL15963) Zhejiang University 2012-08-20 Beauveria bassiana ARSEF 2860
Beauveria bassiana ARSEF 2860
2
(0 x 2)
2 by_platform
by_series
7 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication [degradome] (GSE39307) [HT Sequencing] Illumina Genome Analyzer (Oryza rufipogon) (GPL10246) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
1
(0 x 1)
1 by_platform
by_series
8 Genomic dissection of small RNAs in wild rice (O.rufipogon): lessons for rice domestication (GSE39309) [HT Sequencing] Illumina Genome Analyzer (Oryza rufipogon) (GPL10246) Zhejiang University 2012-07-12 Oryza rufipogon
Oryza rufipogon
1
(0 x 1)
1 by_platform
by_series
9 Investigation of the microRNAs in safflower seed, leaf and petal by high-throughput sequencing (GSE25165) [HT Sequencing] Illumina Genome Analyzer (Carthamus tinctorius) (GPL11168) Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China 2010-11-05 Carthamus tinctorius
Carthamus tinctorius
3
(0 x 3)
1 1 1 by_platform
by_series
10 Identification of miRNA from Porphyra yezoensis by high-throughput sequencing and bioinformatics analysis (GSE20534) [HT Sequencing] Illumina Genome Analyzer (Porphyra yezoensis) (GPL10109) Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China 2010-02-25 Porphyra yezoensis
Porphyra yezoensis
1
(0 x 1)
1 by_platform
by_series
11 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica napus) (GPL15579) Yangzhou University 2013-01-02 Brassica napus
Brassica napus
5
(0 x 5)
5 by_platform
by_series
12 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica rapa) (GPL16440) Yangzhou University 2013-01-02 Brassica rapa
Brassica rapa
1
(0 x 1)
1 by_platform
by_series
13 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica oleracea) (GPL16360) Yangzhou University 2013-01-02 Brassica oleracea
Brassica oleracea
1
(0 x 1)
1 by_platform
by_series
14 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica nigra) (GPL16441) Yangzhou University 2013-01-02 Brassica nigra
Brassica nigra
1
(0 x 1)
1 by_platform
by_series
15 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica juncea) (GPL16442) Yangzhou University 2013-01-02 Brassica juncea
Brassica juncea
1
(0 x 1)
1 by_platform
by_series
16 Gene expression profilling of six species of Brassica and early four generation of resynthesized B. napus (F1-F4) (GSE43246) [HT Sequencing] Illumina HiSeq 2000 (Brassica carinata) (GPL16443) Yangzhou University 2013-01-02 Brassica carinata
Brassica carinata
1
(0 x 1)
1 by_platform
by_series
17 Genome-wide Ste12-binding site mapping in MATa segregants of YJM789 x S96 cross (GSE19635) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Yale University 2009-12-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae
174
(0 x 174)
174 by_platform
by_series
18 Genetic Analysis of Variation in Transcription Factor Binding in Yeast (GSE19636) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Yale University 2009-12-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae
174
(0 x 174)
174 by_platform
by_series
19 Genome-wide profiling of DNA methylation in two Arabidopsis ecotypes and their reciprocal hybrids (GSE34658) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Yale University 2011-12-22 Arabidopsis thaliana
Arabidopsis thaliana
40
(0 x 40)
40 by_platform
by_series
20 Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids. (GSE19602) [HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147) Yale University 2009-12-22 Oryza sativa
Oryza sativa
24
(0 x 24)
24 by_platform
by_series
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