Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,712)		   Tiling Array
(694)		   cDNA Array
(1,562)		   Oligo Array
(1,630)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(777)		   Other
(18)		   All
(6,479)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 [E-MTAB-75] Cryptic unstable transcripts in yeast (GSE25132) [HT Sequencing] 454 GS (Saccharomyces cerevisiae) (GPL11160) European Bioinformatics Institute 2010-11-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 2
(0 x 2) 		2 by_platform
by_series
2 [E-MTAB-610] Tag profiling of genes from two Pachycladon species (GSE30618) [HT Sequencing] Illumina Genome Analyzer IIx (Pachycladon enysii) (GPL13900) European Bioinformatics Institute 2011-07-12 Pachycladon enysii
Pachycladon enysii		 3
(0 x 3) 		3 by_platform
by_series
3 [E-MTAB-610] Tag profiling of genes from two Pachycladon species (GSE30618) [HT Sequencing] Illumina Genome Analyzer IIx (Pachycladon fastigiatum) (GPL13901) European Bioinformatics Institute 2011-07-12 Pachycladon fastigiatum
Pachycladon fastigiatum		 3
(0 x 3) 		3 by_platform
by_series
4 [E-MTAB-5] Dynamic repertoire of a eukaryotic transcriptome surveyed at single nucleotide resolution (GSE25003) [HT Sequencing] Illumina Genome Analyzer (Schizosaccharomyces pombe) (GPL9854) European Bioinformatics Institute 2010-10-28 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 31
(0 x 31) 		31 by_platform
by_series
5 [E-MTAB-587] PCR_artifacts (GSE30616) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) European Bioinformatics Institute 2011-07-12 Arabidopsis thaliana
Arabidopsis thaliana		 3
(0 x 3) 		3 by_platform
by_series
6 [E-MTAB-552] Transcriptome Analysis of the potato (genotype RH89-039-16) (GSE30615) [HT Sequencing] Illumina Genome Analyzer (Solanum tuberosum) (GPL13898) European Bioinformatics Institute 2011-07-12 Solanum tuberosum
Solanum tuberosum		 8
(0 x 8) 		3 2 1 1 1 by_platform
by_series
7 [E-MTAB-552] Transcriptome Analysis of the potato (genotype RH89-039-16) (GSE30615) [HT Sequencing] Illumina Genome Analyzer II (Solanum tuberosum) (GPL13899) European Bioinformatics Institute 2011-07-12 Solanum tuberosum
Solanum tuberosum		 8
(0 x 8) 		1 5 1 1 by_platform
by_series
8 [E-MTAB-444] Transcription profiling by high throughput sequencing of Cleome gynandra developing and mature leaves (GSE30605) [HT Sequencing] Illumina Genome Analyzer II (Cleome gynandra) (GPL13890) European Bioinformatics Institute 2011-07-12 Cleome gynandra
Cleome gynandra		 6
(0 x 6) 		6 by_platform
by_series
9 Whole-genome nucleosome mapping in meiotic diploid S. cerevisiae (GSE26452) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) Memorial Sloan-Kettering Cancer Center 2011-01-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 6
(0 x 6) 		6 by_platform
by_series
10 Whole genome bisulfite sequencing of idm1, rdd, ros1 mutants and Col-0 WT (GSE33071) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) Purdue University 2011-10-19 Arabidopsis thaliana
Arabidopsis thaliana		 7
(0 x 7) 		7 by_platform
by_series
11 Whole genome bisulfite sequencing of idm1, rdd, ros1 mutants and Col-0 WT (GSE33071) [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) Purdue University 2011-10-19 Arabidopsis thaliana
Arabidopsis thaliana		 1
(0 x 1) 		1 by_platform
by_series
12 White-Opaque Switching in Natural MTLa/alpha Isolates of Candida albicans: Evolutionary Implications for Roles in Host Adaptation, Pathogenesis and Sex (GSE43938) [HT Sequencing] Illumina HiSeq 2000 (Candida albicans) (GPL15645) Institute Of Microbiology Chinese Academy of Sciences 2013-01-31 Candida albicans
Candida albicans		 2
(0 x 2) 		2 by_platform
by_series
13 Wheat response to powdery mildew infection and heat stress (GSE27339) [HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467) China Agricultrual University 2011-02-16 Triticum aestivum
Triticum aestivum		 6
(0 x 6) 		6 by_platform
by_series
14 Using RNA-Seq to Profile Soybean Seed Development from Fertilization to Maturity (GSE42871) [HT Sequencing] Illumina Genome Analyzer II (Glycine max) (GPL11192) University of Illinois 2012-12-12 Glycine max
Glycine max		 6
(0 x 6) 		2 4 by_platform
by_series
15 Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems (GSE26757) [HT Sequencing] Illumina Genome Analyzer II (Medicago sativa) (GPL11627) USDA 2011-01-20 Medicago sativa
Medicago sativa		 4
(0 x 4) 		4 by_platform
by_series
16 Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems (GSE26757) [HT Sequencing] 454 GS (Medicago sativa) (GPL11643) USDA 2011-01-20 Medicago sativa
Medicago sativa		 2
(0 x 2) 		2 by_platform
by_series
17 Uridylation of mature miRNAs and siRNAs by the MUT68 nucleotidyltransferase promotes their degradation in Chlamydomonas (GSE17815) [HT Sequencing] Illumina Genome Analyzer II (Chlamydomonas reinhardtii) (GPL9100) University of Delaware 2009-08-26 Chlamydomonas reinhardtii
Chlamydomonas reinhardtii		 4
(0 x 4) 		4 by_platform
by_series
18 Unraveling the KNOTTED1 regulatory network in maize meristems (ChIP-seq) (GSE39161) [HT Sequencing] Illumina Genome Analyzer II (Zea mays) (GPL9361) The Ohio State University 2012-07-06 Zea mays
Zea mays		 6
(0 x 6) 		6 by_platform
by_series
19 Unraveling the KNOTTED1 regulatory network in maize meristems (GSE38487) [HT Sequencing] Illumina HiSeq 2000 (Zea mays) (GPL15463) The Ohio State University 2012-06-05 Zea mays
Zea mays		 20
(0 x 20) 		6 4 10 by_platform
by_series
20 Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs (GSE38535) [HT Sequencing] Illumina HiSeq 2000 (Prunus persica) (GPL15671) USDA-AFRS 2012-06-06 Prunus persica
Prunus persica		 3
(0 x 3) 		1 1 1 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [39]
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