Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(5,614)		   Primates
(0)		   Rodents
(928)		   Mammals
(51)		   Vertebrates
(107)		   Invertebrates
(254)		   Plants
(396)		   Bacteria
(343)		   Viruses
(0)		   Phages
(0)		   Unclassified
(46)		   All
(7,771)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(14)		   GeneChip
(182)		   Tiling Array
(0)		   cDNA Array
(60)		   Oligo Array
(41)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(31)		   Other
(0)		   All
(396)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(18)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(0)		   unclassified
(0)		   all
(31)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM753519 Rice_root_tip-time_point_1-replicate_1 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
2 GSM753520 Rice_root_tip-time_point_1-replicate_2 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
3 GSM753521 Rice_root_tip-time_point_1-replicate_3 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
4 GSM753522 Rice_root_tip-time_point_2-replicate_1 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
5 GSM753523 Rice_root_tip-time_point_2-replicate_2 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
6 GSM753524 Rice_root_tip-time_point_2-replicate_3 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
7 GSM753525 Rice_root-time_point_1-replicate_1 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
8 GSM753526 Rice_root-time_point_1-replicate_2 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
9 GSM753527 Rice_root-time_point_2-replicate_1 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
10 GSM753528 Rice_root-time_point_2-replicate_2 0 Ghent University 2011-07-01 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
11 GSM876135 Mock_infected_rice_root_tip-time_point_1-replicate_1 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
12 GSM876136 Mock_infected_rice_root_tip-time_point_1-replicate_2 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
13 GSM876137 Mock_infected_rice_root_tip-time_point_1-replicate_3 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
14 GSM876138 Mock_infected_rice_root_tip-time_point_2-replicate_1 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
15 GSM876139 Mock_infected_rice_root_tip-time_point_2-replicate_2 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
16 GSM876140 Mock_infected_rice_root_tip-time_point_2-replicate_3 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 meristem/growing tissue Rice root tip
17 GSM876141 Mock_infected_rice_root-time_point_1-replicate_1 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
18 GSM876142 Mock_infected_rice_root-time_point_1-replicate_2 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
19 GSM876143 Mock_infected_rice_root-time_point_2-replicate_1 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
20 GSM876144 Mock_infected_rice_root-time_point_2-replicate_2 0 Ghent University 2012-02-15 [HT Sequencing] Illumina Genome Analyzer II (Oryza sativa Japonica Group) (GPL13808) SRA Oryza sativa Japonica Group
Oryza sativa Japonica Group		 root Rice root
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