Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Plants
(91,454)

Bacteria
(39,082)

Viruses
(1,266)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(298)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(4,443)

Other
(117)

All
(91,454)

brain
(0)

blood
(0)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(49)

young aerial structure
(85)

root
(32)

meristem/growing tissue
(26)

flower/sexual organ
(9)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM502557	180 min cax1-1 treatment #4	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	cax1-1 roots, magnesium sulfate treatment, 180 min
2	GSM502556	180 min cax1-1 treatment #3	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	cax1-1 roots, magnesium sulfate treatment, 180 min
3	GSM502555	180 min cax1-1 treatment #2	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	cax1-1 roots, magnesium sulfate treatment, 180 min
4	GSM502554	180 min cax1-1 treatment #1	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	cax1-1 roots, magnesium sulfate treatment, 180 min
5	GSM502553	180 min col-0 treatment #4	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 180 min
6	GSM502552	180 min col-0 treatment #3	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 180 min
7	GSM502551	180 min col-0 treatment #2	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 180 min
8	GSM502550	180 min col-0 treatment #1	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 180 min
9	GSM502549	90 min col-0 treatment #4	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 90 min
10	GSM502548	90 min col-0 treatment #3	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 90 min
11	GSM502547	90 min col-0 treatment #2	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 90 min
12	GSM502546	90 min col-0 treatment #1	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 90 min
13	GSM502545	45 min col-0 treatment #4	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 45 min
14	GSM502544	45 min col-0 treatment #3	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 45 min
15	GSM502543	45 min col-0 treatment #2	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 45 min
16	GSM502542	45 min col-0 treatment #1	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, magnesium sulfate treatment, 45 min
17	GSM502541	45 min col-0 control #4	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, control, 45 min
18	GSM502540	45 min col-0 control #3	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, control, 45 min
19	GSM502539	45 min col-0 control #2	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, control, 45 min
20	GSM502538	45 min col-0 control #1	37,685	University of Florida	2010-01-29	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	root	col-0 roots, control, 45 min

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