Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,371)		   Tiling Array
(5,043)		   cDNA Array
(23,783)		   Oligo Array
(30,226)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,443)		   Other
(117)		   All
(91,454)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(49)		   young aerial structure
(85)		   root
(32)		   meristem/growing tissue
(26)		   flower/sexual organ
(9)		   seed/fruit/grain
(3)		   pooled
(3)		   unclassified
(91)		   all
(298)		  
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM302812 xue_rice_seed_MPSS 111,161 Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences 2008-07-02 [MPSS] IPPE Rice MPSS (GPL7013) MPSS Oryza sativa
Oryza sativa		 other seed/fruit/grain rice seed small RNA
2 GSM169570 NGS library 26,096 University of Delaware 2007-02-20 [MPSS] Rice mRNA MPSS signatures (GPL3777) MPSS Oryza sativa
Oryza sativa		 other seed/fruit/grain 3 days - rice germinating seed
3 GSM226770 MPSS-SIS-17bp 24,131 University of Manchester 2007-09-04 [MPSS] Arabidopsis mRNA MPSS signatures (GPL5800) MPSS Arabidopsis thaliana
Arabidopsis thaliana		 other seed/fruit/grain Silique - 24 to 48 hr post-fertilization, signature MPSS
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