Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,654)		   Tiling Array
(5,201)		   cDNA Array
(24,041)		   Oligo Array
(30,982)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,835)		   Other
(117)		   All
(93,301)		  
  brain
(48)		   blood
(974)		   connective
(17)		   reproductive
(110)		   muscular
(0)		   digestive
(44)		   liver
(0)		   lung
(68)		   urinary
(22)		   endo/exo-crine
(8)		   embryo
(23)		   adult aerial structure
(4,222)		   young aerial structure
(1,084)		   root
(1,098)		   meristem/growing tissue
(467)		   flower/sexual organ
(1,046)		   seed/fruit/grain
(824)		   pooled
(2,409)		   unclassified
(18,518)		   all
(30,982)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM489053 T. reesei NG14 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 1 description:aCGH NG14.1/QM6a.1
2 GSM489054 T. reesei NG14 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 2 description:aCGH NG14.2/QM6a.2
3 GSM489055 T. reesei NG14 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 3 description:aCGH NG14.3/QM6a.3
4 GSM489056 T. reesei QM6a replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM6a title:T. reesei QM6a replicate 1 description:aCGH QM6a.1/QM6a.1 self-hybridization
5 GSM489057 T. reesei QM6a replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM6a title:T. reesei QM6a replicate 2 description:aCGH QM6a.2/QM6a.2 self-hybridization
6 GSM489058 T. reesei QM6a replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM6a title:T. reesei QM6a replicate 3 description:aCGH QM6a.3/QM6a.3 self-hybridization
7 GSM489059 T. reesei QM9123 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM9123 QM6a title:T. reesei QM9123 replicate 1 description:aCGH QM9123.1/QM6a.1
8 GSM489060 T. reesei QM9123 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM9123 QM6a title:T. reesei QM9123 replicate 2 description:aCGH QM9123.2/QM6a.2
9 GSM489061 T. reesei QM9414 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 1 description:aCGH QM9414.1/QM6a.1
10 GSM489062 T. reesei QM9414 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 2 description:aCGH QM9414.2/QM6a.2
11 GSM489063 T. reesei QM9414 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 3 description:aCGH QM9414.3/QM6a.3
12 GSM489064 T. reesei RutC-30 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 1 description:aCGH RutC-30.1/QM6a.1
13 GSM489065 T. reesei RutC-30 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 2 description:aCGH RutC-30.2/QM6a.2
14 GSM489066 T. reesei RutC-30 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina		 unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 3 description:aCGH RutC-30.3/QM6a.3
15 GSM853423 EMF1_IP-1 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:EMF1 ChIP DNA Input DNA (control genomic DNA) title:EMF1_IP-1
16 GSM853424 EMF1_IP-2 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:EMF1 ChIP DNA Input DNA (control genomic DNA) title:EMF1_IP-2
17 GSM853425 K27-WT-1 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:H3K27me3 ChIP DNA Input DNA (control genomic DNA) title:K27-WT-1
18 GSM853426 K27-WT-2 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:H3K27me3 ChIP DNA Input DNA (control genomic DNA) title:K27-WT-2
19 GSM853427 K27-WT-3 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:H3K27me3 ChIP DNA Input DNA (control genomic DNA) title:K27-WT-3
20 GSM853428 K27-emf1-1 2,160,801 University of California at Berkeley 2011-12-23 [Oligo Array] NimbleGen Zilberman Arabidopsis HD2 array [080709_AT8_DZ_ChIP_HX1] (GPL15056) genomic Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:H3K27me3 ChIP DNA Input DNA (control genomic DNA) title:K27-emf1-1
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