Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,654)		   Tiling Array
(5,201)		   cDNA Array
(24,041)		   Oligo Array
(30,982)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,835)		   Other
(117)		   All
(93,301)		  
  brain
(48)		   blood
(974)		   connective
(17)		   reproductive
(110)		   muscular
(0)		   digestive
(44)		   liver
(0)		   lung
(68)		   urinary
(22)		   endo/exo-crine
(8)		   embryo
(23)		   adult aerial structure
(4,222)		   young aerial structure
(1,084)		   root
(1,098)		   meristem/growing tissue
(467)		   flower/sexual organ
(1,046)		   seed/fruit/grain
(824)		   pooled
(2,409)		   unclassified
(18,518)		   all
(30,982)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM100339 Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #1 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB1507 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #1 description:SB1507: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a in a W303 background.
2 GSM100340 Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #2 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB1507 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #2 description:SB1507: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a in a W303 background.
3 GSM100341 Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #3 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB1507 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB1507 after 3hrs - Replicate #3 description:SB1507: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a in a W303 background.
4 GSM100359 W303 (wild type) after 3hrs in re-replication conditions - Replicate #1 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:W303 after 3hrs in re-replication conditions G1 phase W303 (wild type) title:W303 (wild type) after 3hrs in re-replication conditions - Replicate #1 description:W303: ade2-1 ura3-1 his3-11,15 trp1-1 leu2-3,112 can1-100 lys2::hisG bar1::hisG MATa
5 GSM100360 W303 (wild type) after 3hrs in re-replication conditions - Replicate #2 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:W303 after 3hrs in re-replication conditions G1 phase W303 (wild type) title:W303 (wild type) after 3hrs in re-replication conditions - Replicate #2 description:W303: ade2-1 ura3-1 his3-11,15 trp1-1 leu2-3,112 can1-100 lys2::hisG bar1::hisG MATa
6 GSM100361 W303 (wild type) after 3hrs in re-replication conditions - Replicate #3 41,278 MIT 2006-03-14 [Oligo Array] Agilent Yeast Whole Genome ChIP-on-chip Microarray (GPL3499) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:W303 after 3hrs in re-replication conditions G1 phase W303 (wild type) title:W303 (wild type) after 3hrs in re-replication conditions - Replicate #3 description:W303: ade2-1 ura3-1 his3-11,15 trp1-1 leu2-3,112 can1-100 lys2::hisG bar1::hisG MATa
7 GSM100363 Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #1 10,191 MIT 2006-03-14 [Oligo Array] Agilent-011447 Yeast Oligo Microarray G4140A (Feature Number version) (GPL884) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB2052 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #1 description:SB2052: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a iYDR309C::LYS2::ARS418mut
8 GSM100364 Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #2 10,191 MIT 2006-03-14 [Oligo Array] Agilent-011447 Yeast Oligo Microarray G4140A (Feature Number version) (GPL884) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB2052 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #2 description:SB2052: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a iYDR309C::LYS2::ARS418mut
9 GSM100365 Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #3 10,191 MIT 2006-03-14 [Oligo Array] Agilent-011447 Yeast Oligo Microarray G4140A (Feature Number version) (GPL884) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:SB2052 3hrs after induction of re-replication G1 phase W303 (wild type) title:Re-replication of S.cerevisae strain SB2052 after 3hrs - Replicate #3 description:SB2052: orc6::HISMX6::LEU2::ORC6-ps,rxl ORC2-ps MCM7-NLS URA3::GAL-CDC6∆2-48-HA lys2::hisG bar1::hisG MA a iYDR309C::LYS2::ARS418mut
10 GSM1003883 wildtype 1 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:wildtype 1 ChIP description:wildtype 1
11 GSM1003884 wildtype 2 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:wildtype 2 ChIP description:wildtype 2
12 GSM1003885 hrp1Δhrp3Δ 1 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:hrp1Δhrp3Δ 1 ChIP description:hrp1Δhrp3Δ 1
13 GSM1003886 hrp1Δhrp3Δ 2 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:hrp1Δhrp3Δ 2 ChIP description:hrp1Δhrp3Δ 2
14 GSM1003887 set2Δ 1 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:set2Δ 1 ChIP description:set2Δ 1
15 GSM1003888 set2Δ 2 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:set2Δ 2 ChIP description:set2Δ 2
16 GSM1003889 alp13Δ 1 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:alp13Δ 1 ChIP description:alp13Δ 1
17 GSM1003890 alp13Δ 2 ChIP 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-036227 Schizosaccharomyces pombe sp40c [ProbeName version] (GPL16059) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:cells in log phase title:alp13Δ 2 ChIP description:alp13Δ 2
18 GSM1003956 alp13Δ 1 gene expression 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-031109 Schizosaccharomyces pombe sp40a 029798 [ProbeName version] (GPL16058) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:rRNA depleted RNA of alp13Δ rRNA depleted RNA of wiltype title:alp13Δ 1 gene expression description:alp13Δ 1
19 GSM1003957 alp13d 2 gene expression 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-031109 Schizosaccharomyces pombe sp40a 029798 [ProbeName version] (GPL16058) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:rRNA depleted RNA of alp13Δ rRNA depleted RNA of wiltype title:alp13d 2 gene expression description:alp13d 2
20 GSM1003958 set2Δ gene expression 65,529 Biochemie Zentrum Heidelebrg 2012-09-13 [Oligo Array] Agilent-031109 Schizosaccharomyces pombe sp40a 029798 [ProbeName version] (GPL16058) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:rRNA depleted RNA of set2Δ rRNA depleted RNA of wiltype title:set2Δ gene expression description:set2Δ
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