Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,654)		   Tiling Array
(5,201)		   cDNA Array
(24,041)		   Oligo Array
(30,982)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,835)		   Other
(117)		   All
(93,301)		  
  brain
(48)		   blood
(974)		   connective
(17)		   reproductive
(110)		   muscular
(0)		   digestive
(44)		   liver
(0)		   lung
(68)		   urinary
(22)		   endo/exo-crine
(8)		   embryo
(23)		   adult aerial structure
(4,222)		   young aerial structure
(1,084)		   root
(1,098)		   meristem/growing tissue
(467)		   flower/sexual organ
(1,046)		   seed/fruit/grain
(824)		   pooled
(2,409)		   unclassified
(18,518)		   all
(30,982)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM254078 Medicago_Flower 380,344 Yale University 2008-01-02 [Oligo Array] Yale University MCDB Medicago truncatula NimbleGen 390K Oligo Array (GPL6335) RNA Medicago truncatula
Medicago truncatula		 other flower/sexual organ Medicago flower
2 GSM254085 Soybean_Flower 366,572 Yale University 2008-01-02 [Oligo Array] Yale University MCDB Glycine max NimbleGen 390K Oligo Array (GPL6337) RNA Glycine max
Glycine max		 other flower/sexual organ Soybean flower
3 GSM151360 Panicle D1 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle D1 Panicle without treatment as control sample
4 GSM151361 Panicle D2 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle D2 Panicle without treatment as control sample
5 GSM151362 Panicle D3 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle D3 Panicle without treatment as control sample
6 GSM151363 Panicle D5 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle D5 Panicle without treatment as control sample
7 GSM151364 Panicle S1 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle S1 Panicle without treatment as control sample
8 GSM151365 Panicle S2 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle S2 Panicle without treatment as control sample
9 GSM151366 Panicle S3 60,727 Yale University 2006-12-14 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa		 other flower/sexual organ Panicle S3 Panicle without treatment as control sample
10 GSM157126 251368310001: fiber initials versus ovules 42,034 USDA/ARS 2007-01-19 [Oligo Array] Gossypium hirsutum agilent array version 1.0 (GPL4739) RNA Gossypium hirsutum
Gossypium hirsutum		 ovary total RNA from 1dpa cotton fiber total RNA from 1dpa ovules
11 GSM157128 251368310011: fiber initials versus ovules 42,034 USDA/ARS 2007-01-19 [Oligo Array] Gossypium hirsutum agilent array version 1.0 (GPL4739) RNA Gossypium hirsutum
Gossypium hirsutum		 ovary total RNA from 1dpa cotton fiber total RNA from 1dpa ovules
12 GSM157130 251368310013: fiber initials versus ovules 42,034 USDA/ARS 2007-01-19 [Oligo Array] Gossypium hirsutum agilent array version 1.0 (GPL4739) RNA Gossypium hirsutum
Gossypium hirsutum		 ovary total RNA from 1 dpa cotton ovules total RNA from 1dpa fiber
13 GSM569097 OuterTepal_rep1 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Outer Tepals dissected from mature floral bud
14 GSM569098 InnerTepal_rep1 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Inner Tepals dissected from mature floral bud
15 GSM569099 Stamen_rep1 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Stamens dissected from mature floral bud
16 GSM569100 Carpel_rep1 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Carpels dissected from mature floral bud
17 GSM569102 YBud_rep1 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Pre-microsporangial floral bud
18 GSM569104 OuterTepal_rep2 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Outer Tepals dissected from mature floral bud
19 GSM569105 InnerTepal_rep2 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Inner Tepals dissected from mature floral bud
20 GSM569106 Stamen_rep2 10,263 Univrsity of Florida 2010-07-22 [Oligo Array] FGP Nuphar 11K v1.0 (GPL10719) RNA Nuphar advena
Nuphar advena		 other flower/sexual organ Stamens dissected from mature floral bud
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