Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(31)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(47)		   GeneChip
(1,712)		   Tiling Array
(694)		   cDNA Array
(1,562)		   Oligo Array
(1,630)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(777)		   Other
(18)		   All
(6,479)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Nutrient-regulated transcriptional responses in the brown tide forming alga Aureococcus anophagefferens (GSE21465) [SAGE NlaIII] SAGE:17:NlaIII:Aureococcus anophagefferens (GPL10346) Woods Hole Oceanographic Institution 2010-04-22 Aureococcus anophagefferens
Aureococcus anophagefferens		 95,586
(31,862 x 3) 		3 by_platform
by_series
2 LongSAGE during the initiation of ligninolytic enzymes production in Phanerochaete chrysosporium (GSE6649) [SAGE NlaIII] SAGE:17:NlaIII:Phanerochaete chrysosporium (GPL4722) University of Shiga Prefecture 2007-01-04 Phanerochaete chrysosporium
Phanerochaete chrysosporium		 22,048
(11,024 x 2) 		2 by_platform
by_series
3 Global gene expression analysis of Arabidopsis ppi2-1 mutant (GSE12325) [SAGE NlaIII] SAGE:22:NlaIII:Arabidopsis thaliana (GPL7109) University of Miyazaki 2008-08-04 Arabidopsis thaliana
Arabidopsis thaliana		 118,738
(59,369 x 2) 		2 by_platform
by_series
4 SAGE analysis of maize root segments (GSE25761) [SAGE NlaIII] SAGE:10:NlaIII:Zea mays (GPL1244) University of Illinois 2010-12-01 Zea mays
Zea mays		 14,850
(14,850 x 1) 		1 by_platform
by_series
5 AtSeedlingRootMunitionResponses (GSE560) [SAGE NlaIII] SAGE:10:NlaIII:Arabidopsis thaliana (GPL25) University of Georgia 2003-07-25 Arabidopsis thaliana
Arabidopsis thaliana		 171,534
(57,178 x 3) 		3 by_platform
by_series
6 Loblolly pine - Juvenile vs Mature (GSE583) [SAGE NlaIII] SAGE:10:NlaIII:Pinus taeda (GPL385) University of Georgia 2003-08-08 Pinus taeda
Pinus taeda		 85,282
(42,641 x 2) 		2 by_platform
by_series
7 SAGE tags generated from Triticum aestivum cultivars Scorpion 25 and Xi19 grown under normal and hot/dry conditions (GSE12832) [SAGE NlaIII] SAGE:15:NlaIII:Triticum aestivum (GPL7079) University of Bristol 2008-09-18 Triticum aestivum
Triticum aestivum		 234,240
(39,040 x 6) 		6 by_platform
by_series
8 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) University of Arizona 2004-11-03 Oryza sativa Japonica Group
Oryza sativa Japonica Group		 506,644
(126,661 x 4) 		4 by_platform
by_series
9 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea 70-15 (GPL1676) University of Arizona 2004-11-03 Magnaporthe oryzae 70-15
Magnaporthe oryzae 70-15		 51,925
(51,925 x 1) 		1 by_platform
by_series
10 EST mining of yellow potato and gene expression profiling of its infection by P. infestans using SAGE - SOLEXA (GSE11781) [SAGE NlaIII] SAGE:17:NlaIII:Solanum phureja (GPL6957) Universidad de los Andes 2008-06-13 Solanum phureja
Solanum phureja		 45,754,758
(7,625,793 x 6) 		6 by_platform
by_series
11 Differential gene expression of Appresorium vs Vegetative mycelium of Magnaporthe using oligoarray (GSE5518) [SAGE NlaIII] SAGE:21:NlaIII:Magnaporthe grisea (GPL4085) The Ohio State University 2006-08-15 Magnaporthe grisea
Magnaporthe grisea		 51,925
(51,925 x 1) 		1 by_platform
by_series
12 Development stages of Lentinula edodes (GSE2167) [SAGE NlaIII] SAGE:10:NlaIII:Lentinula edodes (GPL1457) The Chinese University of Hong Kong 2005-01-19 Lentinula edodes
Lentinula edodes		 62,115
(12,423 x 5) 		5 by_platform
by_series
13 Spore formation of Lentinula edodes (GSE4202) [SAGE NlaIII] SAGE:10:NlaIII:Lentinula edodes (GPL1457) The Chinese University of Hong Kong 2006-02-07 Lentinula edodes
Lentinula edodes		 24,846
(12,423 x 2) 		1 1 by_platform
by_series
14 Spore formation of Lentinula edodes (LongSAGE) (GSE25463) [SAGE NlaIII] SAGE:15:NlaIII:Lentinula edodes (GPL11229) The Chinese University of Hong Kong 2010-11-18 Lentinula edodes
Lentinula edodes		 1,052
(526 x 2) 		1 1 by_platform
by_series
15 Stresses induce gene expression in Arabidopsis (GSE54) [SAGE NlaIII] SAGE:10:NlaIII:Arabidopsis thaliana (GPL25) Samuel Roberts Noble Foundation 2002-06-18 Arabidopsis thaliana
Arabidopsis thaliana		 171,534
(57,178 x 3) 		1 2 by_platform
by_series
16 Embryo development of Medicago truncatula (GSE74) [SAGE NlaIII] SAGE:10:NlaIII:Medicago truncatula (GPL184) Samuel Roberts Noble Foundation 2002-07-24 Medicago truncatula
Medicago truncatula		 26,310
(8,770 x 3) 		1 2 by_platform
by_series
17 Transcriptome analysis reveals season-specific RbcS gene expression profiles in diploid Lolium perenne L. (GSE5211) [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 Lolium perenne
Lolium perenne		 140,512
(35,128 x 4) 		4 by_platform
by_series
18 RL-SAGE analysis of Zea mays leaf transcriptome (GSE25994) [SAGE NlaIII] SAGE:17:NlaIII:Zea mays (GPL1462) Ohio State University 2010-12-10 Zea mays
Zea mays		 44,870
(44,870 x 1) 		1 by_platform
by_series
19 High-resolution genome-wide mapping of histone modifications. (GSE6975) [SAGE NlaIII] GMAT (Genome-wide MApping Technique) [NlaIII: Saccharomyces cerevisiae] tag list (GPL4813) NHLBI, NIH 2007-02-06 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 194,228
(48,557 x 4) 		4 by_platform
by_series
20 leaf_greenhouse (GSE2811) [SAGE NlaIII] SAGE:22:NlaIII:Musa acuminata (GPL2542) Katholieke Universiteit Leuven 2005-06-14 Musa acuminata
Musa acuminata		 5,292
(5,292 x 1) 		1 by_platform
by_series
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