Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57

Warning: mysqli_query() [function.mysqli-query]: (HY000/5): Out of memory (Needed 310752 bytes) in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 53

Warning: mysqli_fetch_array() expects parameter 1 to be mysqli_result, boolean given in /opt/services/nig/geo/www-e/webapp/lib/DataAccessMysql.php on line 57
RSS
Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(33)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(58)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(0)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(1)
  HT-Seq
(0)
  Other
(20)
  All
(7,611)
 
1   |   2      »      
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Coordination in the transcriptome and proteome of the diatom Thalassiosira pseudonana reveals a diverse phosphorus stress response (GSE28134) [SAGE NlaIII] SAGE:17:NlaIII:Thalassiosira pseudonana CCMP1335 (GPL13316) Woods Hole Oceanographic Institution 2011-03-23 Thalassiosira pseudonana CCMP1335
Thalassiosira pseudonana CCMP1335
1,562,420
(781,210 x 2)
2 by_platform
by_series
2 Nutrient-regulated transcriptional responses in the brown tide forming alga Aureococcus anophagefferens (GSE21465) [SAGE NlaIII] SAGE:17:NlaIII:Aureococcus anophagefferens (GPL10346) Woods Hole Oceanographic Institution 2010-04-22 Aureococcus anophagefferens
Aureococcus anophagefferens
95,586
(31,862 x 3)
3 by_platform
by_series
3 LongSAGE during the initiation of ligninolytic enzymes production in Phanerochaete chrysosporium (GSE6649) [SAGE NlaIII] SAGE:17:NlaIII:Phanerochaete chrysosporium (GPL4722) University of Shiga Prefecture 2007-01-04 Phanerochaete chrysosporium
Phanerochaete chrysosporium
22,048
(11,024 x 2)
2 by_platform
by_series
4 Global gene expression analysis of Arabidopsis ppi2-1 mutant (GSE12325) [SAGE NlaIII] SAGE:22:NlaIII:Arabidopsis thaliana (GPL7109) University of Miyazaki 2008-08-04 Arabidopsis thaliana
Arabidopsis thaliana
118,738
(59,369 x 2)
2 by_platform
by_series
5 SAGE analysis of maize root segments (GSE25761) [SAGE NlaIII] SAGE:10:NlaIII:Zea mays (GPL1244) University of Illinois 2010-12-01 Zea mays
Zea mays
14,850
(14,850 x 1)
1 by_platform
by_series
6 AtSeedlingRootMunitionResponses (GSE560) [SAGE NlaIII] SAGE:10:NlaIII:Arabidopsis thaliana (GPL25) University of Georgia 2003-07-25 Arabidopsis thaliana
Arabidopsis thaliana
171,534
(57,178 x 3)
3 by_platform
by_series
7 Loblolly pine - Juvenile vs Mature (GSE583) [SAGE NlaIII] SAGE:10:NlaIII:Pinus taeda (GPL385) University of Georgia 2003-08-08 Pinus taeda
Pinus taeda
85,282
(42,641 x 2)
2 by_platform
by_series
8 A defect in ATP-citrate lyase links acetyl-CoA production, virulence factor elaboration and virulence in Cryptococcus neoformans (GSE41066) [SAGE NlaIII] SAGE:17:NlaIII:Cryptococcus neoformans var. grubii H99 (GPL15941) University of British Columbia 2012-09-21 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99
37,066
(18,533 x 2)
1 1 by_platform
by_series
9 SAGE tags generated from Triticum aestivum cultivars Scorpion 25 and Xi19 grown under normal and hot/dry conditions (GSE12832) [SAGE NlaIII] SAGE:15:NlaIII:Triticum aestivum (GPL7079) University of Bristol 2008-09-18 Triticum aestivum
Triticum aestivum
234,240
(39,040 x 6)
6 by_platform
by_series
10 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) University of Arizona 2004-11-03 Oryza sativa Japonica Group
Oryza sativa Japonica Group
506,644
(126,661 x 4)
4 by_platform
by_series
11 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea 70-15 (GPL1676) University of Arizona 2004-11-03 Magnaporthe oryzae 70-15
Magnaporthe oryzae 70-15
51,925
(51,925 x 1)
1 by_platform
by_series
12 EST mining of yellow potato and gene expression profiling of its infection by P. infestans using SAGE - SOLEXA (GSE11781) [SAGE NlaIII] SAGE:17:NlaIII:Solanum phureja (GPL6957) Universidad de los Andes 2008-06-13 Solanum phureja
Solanum phureja
45,754,758
(7,625,793 x 6)
6 by_platform
by_series
13 Differential gene expression of Appresorium vs Vegetative mycelium of Magnaporthe using oligoarray (GSE5518) [SAGE NlaIII] SAGE:21:NlaIII:Magnaporthe grisea (GPL4085) The Ohio State University 2006-08-15 Magnaporthe grisea
Magnaporthe grisea
51,925
(51,925 x 1)
1 by_platform
by_series
14 Development stages of Lentinula edodes (GSE2167) [SAGE NlaIII] SAGE:10:NlaIII:Lentinula edodes (GPL1457) The Chinese University of Hong Kong 2005-01-19 Lentinula edodes
Lentinula edodes
62,115
(12,423 x 5)
5 by_platform
by_series
15 Spore formation of Lentinula edodes (GSE4202) [SAGE NlaIII] SAGE:10:NlaIII:Lentinula edodes (GPL1457) The Chinese University of Hong Kong 2006-02-07 Lentinula edodes
Lentinula edodes
24,846
(12,423 x 2)
1 1 by_platform
by_series
16 Spore formation of Lentinula edodes (LongSAGE) (GSE25463) [SAGE NlaIII] SAGE:15:NlaIII:Lentinula edodes (GPL11229) The Chinese University of Hong Kong 2010-11-18 Lentinula edodes
Lentinula edodes
1,052
(526 x 2)
1 1 by_platform
by_series
17 Stresses induce gene expression in Arabidopsis (GSE54) [SAGE NlaIII] SAGE:10:NlaIII:Arabidopsis thaliana (GPL25) Samuel Roberts Noble Foundation 2002-06-18 Arabidopsis thaliana
Arabidopsis thaliana
171,534
(57,178 x 3)
1 2 by_platform
by_series
18 Embryo development of Medicago truncatula (GSE74) [SAGE NlaIII] SAGE:10:NlaIII:Medicago truncatula (GPL184) Samuel Roberts Noble Foundation 2002-07-24 Medicago truncatula
Medicago truncatula
26,310
(8,770 x 3)
1 2 by_platform
by_series
19 Transcriptome analysis reveals season-specific RbcS gene expression profiles in diploid Lolium perenne L. (GSE5211) [SAGE NlaIII] SAGE:10:NlaIII:Lolium perenne (GPL3969) Pastoral Genomics, c/o ViaLactia Biosciences (NZ) Ltd 2006-07-02 Lolium perenne
Lolium perenne
140,512
(35,128 x 4)
4 by_platform
by_series
20 RL-SAGE analysis of Zea mays leaf transcriptome (GSE25994) [SAGE NlaIII] SAGE:17:NlaIII:Zea mays (GPL1462) Ohio State University 2010-12-10 Zea mays
Zea mays
44,870
(44,870 x 1)
1 by_platform
by_series
1   |   2      »