Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(365)
  Primates
(4)
  Rodents
(306)
  Mammals
(20)
  Vertebrates
(21)
  Invertebrates
(59)
  Plants
(125)
  Bacteria
(66)
  Viruses
(3)
  Phages
(0)
  Unclassified
(11)
  All
(981)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(39)
  Tiling Array
(13)
  cDNA Array
(26)
  Oligo Array
(32)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(9)
  Other
(1)
  All
(125)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Dual roles of the nuclear cap binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis (GSE11043) [Tiling Array] AtTile1R to Arabidopsis Tiling 1.0R (GPL1980) ZMBP - University of Tuebingen 2008-04-03 Arabidopsis thaliana
Arabidopsis thaliana
74,216,640
(6,184,720 x 12)
12 by_platform
by_series
2 A link between RNA metabolism and silencing affecting Arabidopsis development (GSE11070) [Tiling Array] AtTile1F to Arabidopsis Tiling 1.0F (GPL1979) Salk-Institute 2008-04-04 Arabidopsis thaliana
Arabidopsis thaliana
49,477,760
(6,184,720 x 8)
8 by_platform
by_series
3 The Dynamic Transcriptome of Schizosaccharomyces pombe Revealed by RNA/DNA Hybrid Mapping (GSE11619) [Tiling Array] Schizosaccharomyces pombe transcriptome slide 1 (GPL6904) Huntsman Cancer Institute 2008-05-30 Schizosaccharomyces pombe
Schizosaccharomyces pombe
1,217,520
(243,504 x 5)
5 by_platform
by_series
4 The Dynamic Transcriptome of Schizosaccharomyces pombe Revealed by RNA/DNA Hybrid Mapping (GSE11619) [Tiling Array] Schizosaccharomyces pombe transcriptome slide 2 (GPL6905) Huntsman Cancer Institute 2008-05-30 Schizosaccharomyces pombe
Schizosaccharomyces pombe
1,217,520
(243,504 x 5)
5 by_platform
by_series
5 A DNA polymerase α accessory protein, Mcl1, is required for propagation of centromere structures in fission yeast (GSE11102) [Tiling Array] Affymetrix S. pombe Tiling 1.0FR Array (GPL3847) The University of Tokyo 2008-04-09 Schizosaccharomyces pombe
Schizosaccharomyces pombe
502,208
(125,552 x 4)
3 1 by_platform
by_series
6 The Dynamic Transcriptome of Schizosaccharomyces pombe Revealed by RNA/DNA Hybrid Mapping (GSE11619) [Tiling Array] Schizosaccharomyces pombe 44K tiling array (GPL6913) Huntsman Cancer Institute 2008-05-30 Schizosaccharomyces pombe
Schizosaccharomyces pombe
41,549
(41,549 x 1)
1 by_platform
by_series
7 Identification of genomic regions regulated by the Xrn1 and Upf1 proteins (GSE11621) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) UCLA 2008-05-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae
12
(0 x 12)
12 by_platform
by_series
8 A link between RNA metabolism and silencing affecting Arabidopsis development (GSE11070) [Tiling Array] [At35b_MR] Affymetrix Arabidopsis Tiling 1.0R Array (GPL10977) Salk-Institute 2008-04-04 Arabidopsis thaliana
Arabidopsis thaliana
8
(0 x 8)
8 by_platform
by_series
9 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays (GSE11800) [Tiling Array] [Sc03b_MF] Affymetrix GeneChip S. cerevisiae Tiling 1.0F Array (GPL7249) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
10 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays (GSE11800) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
11 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing (GSE11802) [Tiling Array] [Sc03b_MF] Affymetrix GeneChip S. cerevisiae Tiling 1.0F Array (GPL7249) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
12 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing (GSE11802) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4
(0 x 4)
4 by_platform
by_series
13 DNA interactions with the ribosomal enhancer (GSE11340) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) University of Auckland 2008-05-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series