Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(830)
  Primates
(0)
  Rodents
(496)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(0)
  Bacteria
(0)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(2,141)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(54)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(66)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(0)
 
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase (GSE24531) [HT Sequencing] Illumina Genome Analyzer (Vitis vinifera) (GPL9396) Nanjing Agriculture University 2010-10-05 Vitis vinifera
Vitis vinifera
1
(0 x 1)
1 by_platform
by_series
2 Brassinosteroid (BR) plant hormone signaling (GSE25135) [Tiling Array] At35bMR to Arabidopsis Tiling V04-2 (GPL8416) Carnegie Institution of Washington 2010-11-04 Arabidopsis thaliana
Arabidopsis thaliana
1
(0 x 1)
1 by_platform
by_series
3 Identification and comparison of miRNAs involved in cotton fiber elongation between sea-island and upland cotton (GSE25773) [HT Sequencing] Illumina Genome Analyzer (Gossypium barbadense) (GPL11270) Huazhong Agricultural University 2010-12-02 Gossypium barbadense
Gossypium barbadense
1
(0 x 1)
1 by_platform
by_series
4 Identification and comparison of miRNAs involved in cotton fiber elongation between sea-island and upland cotton (GSE25773) [HT Sequencing] Illumina Genome Analyzer (Gossypium hirsutum) (GPL9362) Huazhong Agricultural University 2010-12-02 Gossypium hirsutum
Gossypium hirsutum
1
(0 x 1)
1 by_platform
by_series
5 Fast forward genetics: mutation mapping and identification using next-generation sequencing and enrichment of bulk segregant pools (GSE24511) [HT Sequencing] AB SOLiD System 2.0 (Arabidopsis thaliana) (GPL10272) Wilhelmina Children's Hospital, University Medical Center Utrecht 2010-10-04 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
6 Comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum during infection on different insects (GSE24938) [HT Sequencing] Illumina Genome Analyzer (Metarhizium anisopliae) (GPL11115) Shanghai Institutes for Biological Sciences, CAS 2010-10-26 Metarhizium anisopliae
Metarhizium anisopliae
2
(0 x 2)
2 by_platform
by_series
7 Comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum during infection on different insects (GSE24938) [HT Sequencing] Illumina Genome Analyzer (Metarhizium acridum) (GPL11116) Shanghai Institutes for Biological Sciences, CAS 2010-10-26 Metarhizium acridum
Metarhizium acridum
2
(0 x 2)
2 by_platform
by_series
8 Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations: RNA-Seq (GSE24970) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Yale University 2010-10-27 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
9 Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations (GSE24974) [HT Sequencing] Illumina Genome Analyzer (Arabidopsis thaliana) (GPL9062) Yale University 2010-10-27 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
10 [E-MTAB-75] Cryptic unstable transcripts in yeast (GSE25132) [HT Sequencing] 454 GS (Saccharomyces cerevisiae) (GPL11160) European Bioinformatics Institute 2010-11-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae
2
(0 x 2)
2 by_platform
by_series
11 The DNA damage response transcriptome of the moss Physcomitrella patens (GSE25237) [HT Sequencing] Illumina Genome Analyzer II (Physcomitrella patens) (GPL9916) UCSD 2010-11-09 Physcomitrella patens
Physcomitrella patens
2
(0 x 2)
1 1 by_platform
by_series
12 Identification of miRNAs and their target genes in developing seeds of soybean by deep sequencing (GSE25260) [HT Sequencing] Illumina Genome Analyzer II (Glycine max) (GPL11192) IGDB 2010-11-10 Glycine max
Glycine max
2
(0 x 2)
2 by_platform
by_series
13 Transcript profiling of wild-type and dcl1-5 early globular embryos (GSE25404) [HT Sequencing] Illumina Genome Analyzer II (Arabidopsis thaliana) (GPL9302) Whitehead Institute 2010-11-16 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
14 Genome-wide comparison of H3K27me3 difference between ref6-1 and wild type Col (GSE25446) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
15 Jumonji C domain-containing protein 12 is a Histone H3 Lysine 27 Demethylase (GSE25447) [HT Sequencing] Illumina Genome Analyzer IIx (Arabidopsis thaliana) (GPL11221) Institute of Genetics and Developmental Biology, CAS 2010-11-17 Arabidopsis thaliana
Arabidopsis thaliana
2
(0 x 2)
2 by_platform
by_series
16 A revised mineral nutrient supplement increases biomass and growth rate in Chlamydomonas reinhardtii (GSE25622) [HT Sequencing] Illumina Genome Analyzer (Chlamydomonas reinhardtii) (GPL9152) University of California Los Angeles 2010-11-26 Chlamydomonas reinhardtii
Chlamydomonas reinhardtii
2
(0 x 2)
2 by_platform
by_series
17 A Genome-Wide Characterization of New and Drought Stress Responsive MicroRNAs in Populus euphratica (GSE25747) [HT Sequencing] Illumina Genome Analyzer (Populus euphratica) (GPL11262) Yale University 2010-12-01 Populus euphratica
Populus euphratica
2
(0 x 2)
2 by_platform
by_series
18 Small RNA sequencing in Medicago truncatula roots (Glomus intraradices colonized and non-colonized) (GSE26216) [HT Sequencing] Illumina Genome Analyzer II (Medicago truncatula) (GPL11345) University of Luxembourg 2010-12-21 Medicago truncatula
Medicago truncatula
2
(0 x 2)
2 by_platform
by_series
19 Degradome sequencing in Medicago truncatula roots (Glomus intraradices colonized and non-colonized) (GSE26217) [HT Sequencing] Illumina Genome Analyzer II (Medicago truncatula) (GPL11345) University of Luxembourg 2010-12-21 Medicago truncatula
Medicago truncatula
2
(0 x 2)
2 by_platform
by_series
20 Investigation of the microRNAs in safflower seed, leaf and petal by high-throughput sequencing (GSE25165) [HT Sequencing] Illumina Genome Analyzer (Carthamus tinctorius) (GPL11168) Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China 2010-11-05 Carthamus tinctorius
Carthamus tinctorius
3
(0 x 3)
1 1 1 by_platform
by_series