Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(100)		   Primates
(0)		   Rodents
(43)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(13)		   Bacteria
(57)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(258)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(1)		   cDNA Array
(4)		   Oligo Array
(5)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(13)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL14861 Agilent-014810 UMCU-Y44K-3.0 45,220 UMC Utrecht 2011-11-09 Holstege Lab, UMC Utrecht, The Netherlands Saccharomyces cerevisiae
Saccharomyces cerevisiae		 Oligo Array in situ oligonucleotide, Agilent-014810 UMCU-Y44K-3.0, A-UMCU-Y44K-3.0 Agilent design ID: 014810
2 GPL15707 Galbraith Laboratory Arabidopsis thaliana 29.1k Operon Long Oligonucleotide Microarray version 3.0 (Atq3.6.4.Z) 29,109 Radboud University Nijmegen 2012-06-18 Galbraith Laboratory, University of Arizona Arabidopsis thaliana
Arabidopsis thaliana		 Oligo Array spotted oligonucleotide, Galbraith Laboratory Arabidopsis thaliana 29.1k Operon Long Oligonucleotide Microarray version 3.0 (Atq3.6.4.Z),
3 GPL2907 Qiagen-Operon Arabidopsis 28.8k Genome Array (AtOligo 1.16.2.Y) 28,800 Plant Research International BV 2005-09-30 University of Arizona (Galbraith Lab) Arabidopsis thaliana
Arabidopsis thaliana		 Oligo Array spotted oligonucleotide, Qiagen-Operon Arabidopsis 28.8k Genome Array (AtOligo 1.16.2.Y), ArrayIt® brand SuperAmine 2 Microarray Substrates (25 x 76 mm). 48 pins=12 metarows and 4 metacolumns, and the subarrays comprise 24 columns and 25 rows (20 x 60 mm).
4 GPL3357 CATMA version 2 24,907 University of Amsterdam 2006-01-12 Utrecht University - Molecular Genetics Group Arabidopsis thaliana
Arabidopsis thaliana		 cDNA Array spotted DNA/cDNA, CATMA version 2, CATMA (Complete Arabidopsis Transcriptome MicroArray) is a spotted microarray of Arabidopsis thaliana gene specific tags (GSTs).
5 GPL8219 CATMA version 2 TIGR 8.0 24,576 University of Amsterdam 2009-02-22 Utrecht University - Molecular Genetics Group Arabidopsis thaliana
Arabidopsis thaliana		 cDNA Array spotted DNA/cDNA, CATMA version 2 TIGR 8.0, CATMA (Complete Arabidopsis Transcriptome MicroArray) is a spotted microarray of Arabidopsis thaliana gene specific tags (GSTs).
6 GPL11232 A-UMCU-Y16k-1.3 15,552 UMC Utrecht 2010-11-19 Holstege Lab, UMC Utrecht, The Netherlands Saccharomyces cerevisiae
Saccharomyces cerevisiae		 Oligo Array spotted oligonucleotide, A-UMCU-Y16k-1.3,
7 GPL6225 DSM PENa520255F Penicillium chrysogenum 14k v1.0 15,531 DSM Anti Infectives 2007-12-03 Affymetrix Penicillium chrysogenum
Penicillium chrysogenum		 GeneChip in situ oligonucleotide, DSM PENa520255F Penicillium chrysogenum 14k v1.0, Penicillium chrysogenum strain Wisconsin 54-1255
8 GPL6758 [dsmM_ANIGERa_anColl] DSM Aspergillus niger CBS513.88 14k v1 14,554 DSM Food Specialties 2008-04-21 Affymetrix, Inc., Santa Clara, CA Aspergillus niger CBS 513.88
Aspergillus niger CBS 513.88		 GeneChip in situ oligonucleotide, [dsmM_ANIGERa_anColl] DSM Aspergillus niger CBS513.88 14k v1,
9 GPL583 Agilent Oligo Yeast 10,807 Institute of Biology 2003-11-24 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 Oligo Array in situ oligonucleotide, Agilent Oligo Yeast, Microarray Profile Agilent's Yeast Oligo Microarray contains 60-mer oligonucleotide probes to 6,256 annotated ORFs in the 25-May-2002 ORF list for the S288C strain of Saccharomyces cerevisiae. The ORF list was downloaded from the Saccharomyces Genome Database (SGD weblink below) at Stanford University. This public domain site maintains the official database of the molecular biology of the yeast Saccharomyces cerevisiae, as well as the Gene Name Registry for this organism. Probe Design Powerful probe selection algorithms designed by Agilent were used to select unique probes that maximize probe sensitivity and minimize the potential for cross hybridization. Agilent's SurePrint Technology was employed to synthesize the oligos directly on the microarray's surface in an iterative, flexible manner.
10 GPL13246 Food Safety Potato cDNA Microarray 4K 2.0 4,096 RIKILT, institute of food safety 2011-03-03 ServiceXS, Leiden, the Netherlands Solanum tuberosum
Solanum tuberosum		 cDNA Array spotted DNA/cDNA, Food Safety Potato cDNA Microarray 4K 2.0,
11 GPL6993 Food Safety Potato cDNA Microarray 1.0 4,006 RIKILT, institute of food safety 2008-06-24 RIKILT Institute of Food Safety Solanum tuberosum,Solanum phureja
Solanum tuberosum,Solanum phureja		 cDNA Array spotted DNA/cDNA, Food Safety Potato cDNA Microarray 1.0,
12 GPL4992 Quantitative proteomics of anaerobic and aerobic yeast cultures 892 Delft University of Technology 2007-03-14 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 Other MS, Quantitative proteomics of anaerobic and aerobic yeast cultures, Proteins identified in quantitative analysis of anaerobic and aerobic yeast cultures
13 GPL13479 Affymetrix AGRONOMICS Tiling Array 0 Plant Research International 2011-05-02 Affymetrix Arabidopsis thaliana
Arabidopsis thaliana		 Tiling Array in situ oligonucleotide, Affymetrix AGRONOMICS Tiling Array,
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