Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(628)
  Primates
(0)
  Rodents
(361)
  Mammals
(12)
  Vertebrates
(68)
  Invertebrates
(91)
  Plants
(119)
  Bacteria
(143)
  Viruses
(0)
  Phages
(0)
  Unclassified
(10)
  All
(1,432)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(73)
  Tiling Array
(3)
  cDNA Array
(4)
  Oligo Array
(22)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(13)
  Other
(4)
  All
(119)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression profiling of yeast kinase and phosphatase knockouts (GSE25644) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2010-11-29 Saccharomyces cerevisiae
Saccharomyces cerevisiae
7,216,128
(15,552 x 464)
318 146 by_platform
by_series
2 Gene deletion expression profiles of yeast chromatin modifiers (GSE25909) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2010-12-07 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4,961,088
(15,552 x 319)
319 by_platform
by_series
3 Glucose signaling (GSE33099) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2011-10-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4,867,776
(15,552 x 313)
183 130 by_platform
by_series
4 Deletion mutant analysis of established glucose signaling and metabolic pathway members in Saccharomyces cerevisiae (GSE33097) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2011-10-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae
4,587,840
(15,552 x 295)
183 112 by_platform
by_series
5 yeast wt pool (GSE42215) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2012-11-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
3,110,400
(15,552 x 200)
200 by_platform
by_series
6 yeast wt pool - plate reader (GSE42217) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2012-11-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
3,110,400
(15,552 x 200)
4 196 by_platform
by_series
7 Saccharomyces cerevisiae chemostat steady state microarray compendium (GSE11452) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2008-05-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1,586,950
(9,335 x 170)
170 by_platform
by_series
8 Root and shoot Jamonic Acid induction in Brassica oleraceae (GSE38784) [Oligo Array] Galbraith Laboratory Arabidopsis thaliana 29.1k Operon Long Oligonucleotide Microarray version 3.0 (Atq3.6.4.Z) (GPL15707) Radboud University Nijmegen 2012-06-18 Brassica oleracea
Brassica oleracea
1,542,777
(29,109 x 53)
18 17 18 by_platform
by_series
9 Kaplan2013: High-Resolution, Quantitative Genetic Analysis of RNA Polymerase II (GSE47429) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht, Netherlands 2013-05-28 Saccharomyces cerevisiae
Saccharomyces cerevisiae
886,464
(15,552 x 57)
55 2 by_platform
by_series
10 Implications of transcriptomics, proteomics and metabolomics analysis of maize seeds for food safety (GSE15853) [Oligo Array] Maize oligo array version 1.9 array A (GPL5439) RIKILT, institute of food safety 2009-04-27 Zea mays
Zea mays
584,064
(32,448 x 18)
18 by_platform
by_series
11 Implications of transcriptomics, proteomics and metabolomics analysis of maize seeds for food safety (GSE15853) [Oligo Array] Maize oligo array version 1.9 array B (GPL5440) RIKILT, institute of food safety 2009-04-27 Zea mays
Zea mays
584,064
(32,448 x 18)
18 by_platform
by_series
12 Expression profiles of the NuB4/HAT-B complex and histone knockouts (GSE30168) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2011-06-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae
559,872
(15,552 x 36)
24 12 by_platform
by_series
13 Strigolactone biosynthesis requires the symbiotic GRAS-type transcription factors NSP1 and NSP2 (GSE26548) [GeneChip] [Medicago] Affymetrix Medicago Genome Array (GPL4652) Wageningen University 2011-01-11 Medicago truncatula
Medicago truncatula
551,502
(61,278 x 9)
9 by_platform
by_series
14 Slx5_Slx8_Genome_Stability (GSE33929) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht, Netherlands 2011-11-23 Saccharomyces cerevisiae
Saccharomyces cerevisiae
528,768
(15,552 x 34)
34 by_platform
by_series
15 Gene deletion expression profiles of SAGA, TREX2 and Sem1 (GSE39861) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2012-08-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae
497,664
(15,552 x 32)
32 by_platform
by_series
16 Root transcript profiles of two Rorippa (Brassicaceae) species and their F1 hybrid after complete submergence (GSE13641) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Universiteit van Amsterdam 2008-11-18 Rorippa amphibia
Rorippa amphibia
456,200
(22,810 x 20)
12 8 by_platform
by_series
17 RNAPII CTD dataset (GSE43120) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht, Netherlands 2012-12-21 Saccharomyces cerevisiae
Saccharomyces cerevisiae
373,248
(15,552 x 24)
4 4 16 by_platform
by_series
18 Comparison of gene expression between wild type and FUL1/2 knockdown tomato fruits (GSE41560) [Oligo Array] Agilent-022270 Tomato Gene Expression Microarray (Feature Number version) (GPL10570) Plant Resarch International 2012-10-12 Solanum lycopersicum
Solanum lycopersicum
361,760
(45,220 x 8)
8 by_platform
by_series
19 Expression profiles of histone point mutants (GSE39903) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2012-08-06 Saccharomyces cerevisiae
Saccharomyces cerevisiae
342,144
(15,552 x 22)
22 by_platform
by_series
20 yeast wt-matA pool - plate reader (GSE42241) [Oligo Array] A-UMCU-Y16k-1.3 (GPL11232) UMC Utrecht 2012-11-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae
311,040
(15,552 x 20)
20 by_platform
by_series
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