Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(72)
  Primates
(0)
  Rodents
(114)
  Mammals
(3)
  Vertebrates
(1)
  Invertebrates
(5)
  Plants
(44)
  Bacteria
(15)
  Viruses
(1)
  Phages
(0)
  Unclassified
(0)
  All
(255)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(5)
  Tiling Array
(0)
  cDNA Array
(18)
  Oligo Array
(21)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(44)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Arabidopsis Transcriptome (GSE1599) [Oligo Array] OAR27K (GPL988) Yale University 2004-07-26 Arabidopsis thaliana
Arabidopsis thaliana
1,437,696
(27,648 x 52)
1 9 13 6 9 14 by_platform
by_series
2 Exploring functional relationships between components of the gene expression machinery (GSE1684) [Oligo Array] Yeast Splicing/Expression Chip v6 (GPL1410) University of California Santa Cruz 2004-08-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1,400,000
(20,000 x 70)
70 by_platform
by_series
3 Solar UV-B regulation of high altitude maize (GSE1807) [cDNA Array] ZmDB Array Unigene-1-01-01 (GPL498) Universidad Nacional de Rosario 2004-09-29 Zea mays
Zea mays
558,624
(16,928 x 33)
33 by_platform
by_series
4 Exploring functional relationships between components of the gene expression machinery (GSE1684) [Oligo Array] Yeast Splicing Chip v5.1 (GPL1408) University of California Santa Cruz 2004-08-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae
409,600
(6,400 x 64)
64 by_platform
by_series
5 Time course of Arabidopsis seedlings treated with 6-Benzyl adenine (GSE1766) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Institute of Biology 2004-09-15 Arabidopsis thaliana
Arabidopsis thaliana
296,530
(22,810 x 13)
13 by_platform
by_series
6 A novel response to microtubule perturbation in meiosis (GSE1693) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Biozentrum and Swiss Institute of Bioinformatics 2004-08-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae
242,710
(9,335 x 26)
26 by_platform
by_series
7 Benomyl dose-response (GSE1752) [Oligo Array] Hopkins Tag Array (GPL1444) Johns Hopkins University School of Medicine 2004-09-14 Saccharomyces cerevisiae
Saccharomyces cerevisiae
225,750
(22,575 x 10)
10 by_platform
by_series
8 Two-dimensional transcriptome analysis in chemostat cultures of S. cerevisiae (GSE1723) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2004-09-02 Saccharomyces cerevisiae
Saccharomyces cerevisiae
224,040
(9,335 x 24)
24 by_platform
by_series
9 Integrating phenotypic and expression profiles to map arsenic response networks (GSE1798) [Oligo Array] Agilent-011447 Yeast Oligo Microarray G4140A (Feature Number version) (GPL884) NIEHS 2004-09-27 Saccharomyces cerevisiae
Saccharomyces cerevisiae
216,140
(10,807 x 20)
20 by_platform
by_series
10 Solar UV-B regulation of high altitude maize (GSE1807) [cDNA Array] ZmDB Array Unigene-1-01-07 (GPL499) Universidad Nacional de Rosario 2004-09-29 Zea mays
Zea mays
207,552
(17,296 x 12)
12 by_platform
by_series
11 top1 (GSE1543) [cDNA Array] Millgate Poppy Array #2 (GPL1327) CSIRO 2004-07-06 Papaver somniferum
Papaver somniferum
203,136
(16,928 x 12)
12 by_platform
by_series
12 Rpd3 and histone H3 and H4 deletions/mutations (GSE1639) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Wadsworth Center 2004-08-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae
168,030
(9,335 x 18)
4 14 by_platform
by_series
13 Time course of glycine addition or withdrawal (GSE1554) [cDNA Array] Ontario Cancer Institute full-genome S. cerevisiae ORF array (Version: GP_Y6.4k1_v2) (GPL1336) University of Toronto 2004-07-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
153,600
(12,800 x 12)
12 by_platform
by_series
14 Overlapping gene regulation by cytosine methylation and histone deacetylation (GSE1612) [cDNA Array] MSU-4_01-02 (GPL1382) Washington University 2004-07-27 Arabidopsis thaliana
Arabidopsis thaliana
153,600
(15,360 x 10)
10 by_platform
by_series
15 Temperature shift time-course of Pre-mRNA splicing factor mutants (GSE1784) [cDNA Array] S.cerevisiae microarray (GPL1458) Indian Institute of Science 2004-09-21 Saccharomyces cerevisiae
Saccharomyces cerevisiae
152,400
(6,350 x 24)
24 by_platform
by_series
16 Integrating phenotypic and expression profiles to map arsenic response networks (GSE1798) [cDNA Array] NIEHS Yeast Chip v1.0 (GPL1474) NIEHS 2004-09-27 Saccharomyces cerevisiae
Saccharomyces cerevisiae
134,400
(6,720 x 20)
20 by_platform
by_series
17 The SUCAST catalogue (GSE1702) [cDNA Array] SUCAST1920v2 (GPL1375) Universidade Estadual de Campinas - UNICAMP 2004-08-24 Saccharum officinarum
Saccharum officinarum
129,024
(4,608 x 28)
16 4 4 4 by_platform
by_series
18 Analyzing the role of transcription elongation factors Spt4-5 in splicing (GSE1610) [Oligo Array] Yeast Splicing Chip v5.0 (GPL1370) University of California Santa Cruz 2004-07-26 Saccharomyces cerevisiae
Saccharomyces cerevisiae
126,720
(5,760 x 22)
22 by_platform
by_series
19 The SUCAST catalogue (GSE1702) [cDNA Array] SUCAST1920v3 (GPL1376) Universidade Estadual de Campinas - UNICAMP 2004-08-24 Saccharum officinarum
Saccharum officinarum
119,808
(4,608 x 26)
8 4 4 4 6 by_platform
by_series
20 Steady state +/- Gly (GSE1553) [cDNA Array] Ontario Cancer Institute full-genome S. cerevisiae ORF array (Version: GP_Y6.4k1_v2) (GPL1336) University of Toronto 2004-07-09 Saccharomyces cerevisiae
Saccharomyces cerevisiae
102,400
(12,800 x 8)
8 by_platform
by_series
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