Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(574)
  Primates
(0)
  Rodents
(337)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(212)
  Bacteria
(0)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(1,500)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(66)
  Tiling Array
(0)
  cDNA Array
(0)
  Oligo Array
(52)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(212)
 
1   |   2   |   3   |   4   |   5      »      [11]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Allele specific expression in Arabidopsis thaliana Col-0 x Van-0 F1 hybrids (GSE16520) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-09 Arabidopsis thaliana
Arabidopsis thaliana
104,674,083
(2,434,281 x 43)
43 by_platform
by_series
2 Genomic DNA mixture series in Allele Specific Expression study (GSE16504) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-08 Arabidopsis thaliana
Arabidopsis thaliana
41,382,777
(2,434,281 x 17)
17 by_platform
by_series
3 mRNA samples in Allele Specific Expression study (GSE16506) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-08 Arabidopsis thaliana
Arabidopsis thaliana
29,211,372
(2,434,281 x 12)
12 by_platform
by_series
4 Genomic DNA concentration series in Allele Specific Expression study (GSE16503) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-08 Arabidopsis thaliana
Arabidopsis thaliana
24,342,810
(2,434,281 x 10)
10 by_platform
by_series
5 Binding data for nine transcription factors for S. cerevisiae salt response (GSE15639) [Tiling Array] Snyder - Nimblegen S.cerevisiae WGT 50-60; 50-120 (GPL3541) Yale University 2009-04-10 Saccharomyces cerevisiae
Saccharomyces cerevisiae
18,235,260
(303,921 x 60)
60 by_platform
by_series
6 Genomic DNA 1:1 mixtures in Allele Specific Expression study (GSE16505) [Tiling Array] Arabidopsis thaliana SNP-tiling array AtSNPtile ver. 1 (GPL8655) University of Chicago 2009-06-08 Arabidopsis thaliana
Arabidopsis thaliana
9,737,124
(2,434,281 x 4)
4 by_platform
by_series
7 Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids (GSE16136) [cDNA Array] SAM1.1a (GPL3333) Iowa State University 2009-05-15 Zea mays
Zea mays
6,624,000
(19,200 x 345)
345 by_platform
by_series
8 eqtl analysis (random pair design)-Establishing the network of seed gene expression and analysis of its biodiversity (GSE16393) [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.2 (GPL4346) INRA 2009-06-02 Arabidopsis thaliana
Arabidopsis thaliana
4,050,560
(25,316 x 160)
160 by_platform
by_series
9 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola (GSE16793) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Iowa State University 2009-06-24 Oryza sativa
Oryza sativa
3,442,860
(57,381 x 60)
60 by_platform
by_series
10 Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids (GSE16136) [cDNA Array] SAM3.0 (GPL3538) Iowa State University 2009-05-15 Zea mays
Zea mays
2,880,000
(16,000 x 180)
180 by_platform
by_series
11 Populus stress response: nitrogen limitation, leaf wounding, and methyl jasmonate feeding of cell culture (GSE16786) [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) University of Georgia 2009-06-24 Populus tremuloides
Populus tremuloides
2,702,172
(61,413 x 44)
12 4 28 by_platform
by_series
12 rice whole transcriptome surveyed by high throughput sequencing technology (GSE16507) [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) Beijing Genomics Institute at Shenzhen 2009-06-08 Oryza sativa
Oryza sativa
2,517,554
(1,258,777 x 2)
1 1 by_platform
by_series
13 Expression profiling of in vitro Poplar roots during early interaction with the ectomycorrhizal fungus Laccaria bicolor (GSE16662) [Oligo Array] Populus 2.0 (GPL2699) INRA 2009-06-17 Populus tremula x Populus alba
Populus tremula x Populus alba
2,330,040
(388,340 x 6)
6 by_platform
by_series
14 Transcription profiling of Brassica lines (GSE15915) [Oligo Array] Agilent Custom Brassica 60-mer two-color microarray (GPL8513) John Innes Centre 2009-04-30 Brassica napus
Brassica napus
1,681,152
(105,072 x 16)
16 by_platform
by_series
15 A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression array: Transcript and Genome Hybridizations (GSE16341) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) National Institute of Genetics 2009-05-29 Oryza sativa Indica Group
Oryza sativa Indica Group
1,549,287
(57,381 x 27)
10 17 by_platform
by_series
16 Systematic planning of genome-scale experiments in poorly studied species. (GSE16544) [Oligo Array] Lewis-Sigler Institute Saccharomyces 13K [20070608MD_PMC] (GPL8667) University of Washington 2009-06-10 Saccharomyces bayanus
Saccharomyces bayanus
1,486,848
(12,288 x 121)
121 by_platform
by_series
17 Uncovering the Arabidopsis thaliana nectary transcriptome: nectary and reference tissues (GSE15617) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) University of Minnesota Duluth 2009-04-09 Arabidopsis thaliana
Arabidopsis thaliana
1,345,790
(22,810 x 59)
8 6 45 by_platform
by_series
18 OsMKK4 regulated genes (GSE15613) [Oligo Array] Agilent-015241 Rice Gene Expression 4x44K Microarray (Feature Number version) (GPL6864) National Institute of Agrobiological Sciences 2009-04-09 Oryza sativa
Oryza sativa
1,175,720
(45,220 x 26)
26 by_platform
by_series
19 Expression profiling and functional analysis of poplar WRKY23 reveals a regulatory role in defense (GSE16420) [GeneChip] [Poplar] Affymetrix Poplar Genome Array (GPL4359) Natural Resources Canada 2009-06-03 Populus tremula x Populus alba
Populus tremula x Populus alba
1,105,434
(61,413 x 18)
18 by_platform
by_series
20 Hybrid Poplar H11-11 Systemic Herbivory Response (GSE16383) [cDNA Array] Treenomix poplar 15.5K cDNA microarray (GPL5921) University of British Columbia 2009-06-02 Populus trichocarpa x Populus deltoides
Populus trichocarpa x Populus deltoides
1,036,800
(17,280 x 60)
60 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [11]