Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(811)		   Primates
(10)		   Rodents
(564)		   Mammals
(32)		   Vertebrates
(48)		   Invertebrates
(184)		   Plants
(227)		   Bacteria
(112)		   Viruses
(2)		   Phages
(0)		   Unclassified
(5)		   All
(2,002)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(85)		   Tiling Array
(12)		   cDNA Array
(22)		   Oligo Array
(62)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(46)		   Other
(0)		   All
(227)		  
1   |   2   |   3   |   4   |   5      »      [12]
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings (GSE28297) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Plant Gene Expression Center/UC Berkeley 2011-03-31 Arabidopsis thaliana
Arabidopsis thaliana		 684,300
(22,810 x 30) 		30 by_platform
by_series
2 Ploidy influences the cellular responses of gross chromosomal rearrangements in Saccharomyces cerevisiae (GSE28285) [Oligo Array] ENS SGDB Saccharomyces cerevisiae 15k_v1.0 (GPL6035) Ecole Normale Supérieure 2011-03-31 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 440,832
(15,744 x 28) 		4 24 by_platform
by_series
3 Tripartite organization of centromeric chromatin in budding yeast (GSE28298) [HT Sequencing] Illumina HiSeq 2000 (Saccharomyces cerevisiae) (GPL13821) Fred Hutchinson Cancer Research Center 2011-03-31 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 28
(0 x 28) 		28 by_platform
by_series
4 Microarray hybridization data from the root tips of 5-day-old Arabidopsis thaliana seedlings grown on tilted, hard agar surfaces (GSE28275) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) University of Wisconsin 2011-03-30 Arabidopsis thaliana
Arabidopsis thaliana		 205,290
(22,810 x 9) 		9 by_platform
by_series
5 Transcriptional profiling during pollination in Ophrys fusca, through cDNA microarrays (GSE28273) [cDNA Array] BioFIG_Ophrys fusca_custom-made_spotted cDNA array (GPL13350) Plant Systems Biology Lab 2011-03-30 Ophrys fusca
Ophrys fusca		 48,384
(3,456 x 14) 		14 by_platform
by_series
6 Patterns and mechanisms of ancestral histone protein inheritance in budding yeast (GSE28269) [HT Sequencing] Illumina Genome Analyzer (Saccharomyces cerevisiae) (GPL9134) The Hebrew University of Jerusalem 2011-03-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 16
(0 x 16) 		2 14 by_platform
by_series
7 Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler). (GSE28281) [HT Sequencing] Illumina Genome Analyzer II (Brassica rapa subsp. chinensis) (GPL13353) Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences 2011-03-30 Brassica rapa subsp. chinensis
Brassica rapa subsp. chinensis		 5
(0 x 5) 		1 4 by_platform
by_series
8 Expression profile of maize´s stalk challenged with the corn borer Sesamia nonagrioides (GSE28244) [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) Mision Biologica de Galicia (CSIC) 2011-03-29 Zea mays
Zea mays		 141,872
(17,734 x 8) 		8 by_platform
by_series
9 Expression data from transgenic rice with OsEATB (GSE28229) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Fudan university 2011-03-29 Oryza sativa
Oryza sativa		 114,762
(57,381 x 2) 		2 by_platform
by_series
10 Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae inoculated cotton roots (GSE28236) [HT Sequencing] Illumina Genome Analyzer (Gossypium hirsutum) (GPL9362) Shandong Agricultural University 2011-03-29 Gossypium hirsutum
Gossypium hirsutum		 2
(0 x 2) 		2 by_platform
by_series
11 Genome-wide profiling of miRNAs and other small non-coding RNAs in the Verticillium dahliae inoculated cotton roots (GSE28236) [HT Sequencing] Illumina Genome Analyzer (Gossypium barbadense) (GPL11270) Shandong Agricultural University 2011-03-29 Gossypium barbadense
Gossypium barbadense		 2
(0 x 2) 		2 by_platform
by_series
12 eif3k/WT polysome loading and transcript levels (GSE28224) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) the University of Tennessee 2011-03-28 Arabidopsis thaliana
Arabidopsis thaliana		 410,580
(22,810 x 18) 		18 by_platform
by_series
13 Expression data from transgenic rice with anti-OsPDCD5 (GSE28209) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Fudan university 2011-03-28 Oryza sativa
Oryza sativa		 344,286
(57,381 x 6) 		6 by_platform
by_series
14 eif3k/WT polysome loading (GSE28223) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) the University of Tennessee 2011-03-28 Arabidopsis thaliana
Arabidopsis thaliana		 273,720
(22,810 x 12) 		12 by_platform
by_series
15 Comparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose (GSE28227) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) University of Missouri-Columbia 2011-03-28 Arabidopsis thaliana
Arabidopsis thaliana		 273,720
(22,810 x 12) 		12 by_platform
by_series
16 A family of secreted pathogenesis-related proteins in Candida albicans (GSE28212) [Oligo Array] FhG_IGB_MBT Candida albicans oligo array V1 (GPL10374) Fraunhofer IGB 2011-03-28 Candida albicans
Candida albicans		 153,600
(12,800 x 12) 		12 by_platform
by_series
17 eif3k/WT transcript levels (GSE28222) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) the University of Tennessee 2011-03-28 Arabidopsis thaliana
Arabidopsis thaliana		 136,860
(22,810 x 6) 		6 by_platform
by_series
18 Identifying the signaling cascades and regulatory mechanisms that control osmotic stress response (GSE28213) [Oligo Array] Agilent-016322 Yeast Gene Expression 8x15K Microarray (Systematic Name version) (GPL13340) Carnegie Mellon University 2011-03-28 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 99,648
(6,228 x 16) 		16 by_platform
by_series
19 Identifying the signaling cascades and regulatory mechanisms that control osmotic stress response (GSE28213) [Oligo Array] Agilent-032180 Saccharomyces cerevisiae Gene Expression 8x60K Microarray (GPL14666) Carnegie Mellon University 2011-03-28 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 74,760
(6,230 x 12) 		12 by_platform
by_series
20 Detection of S. cerevisiae fragments in the genome of S. bayanus strains with aCGH on Yeast_2 Affymetrix array. (GSE28225) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) INRA 2011-03-28 Saccharomyces bayanus
Saccharomyces bayanus		 54,640
(10,928 x 5) 		5 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [12]
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