Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(355)		   Primates
(4)		   Rodents
(234)		   Mammals
(15)		   Vertebrates
(28)		   Invertebrates
(47)		   Plants
(214)		   Bacteria
(86)		   Viruses
(0)		   Phages
(0)		   Unclassified
(2)		   All
(985)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(51)		   Tiling Array
(10)		   cDNA Array
(96)		   Oligo Array
(54)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(1)		   Other
(0)		   All
(214)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 GAL-NMD2 (GSE9482) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Massachusetts Medical School 2007-10-31 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 373,400
(9,335 x 40) 		40 by_platform
by_series
2 Glucose Pulse to sfp1delta continuous cultures (GSE9644) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2007-11-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 242,710
(9,335 x 26) 		26 by_platform
by_series
3 mRNA expression data in Δrsf1mutant during growth on, and transition to growth on glycerol as sole carbon source (GSE10031) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Wayne State University 2007-12-27 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 205,370
(9,335 x 22) 		22 by_platform
by_series
4 Expression data from yeast with modulated expression of base excision repair players (GSE9295) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) MIT 2007-10-11 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 168,030
(9,335 x 18) 		18 by_platform
by_series
5 Saccharomyces cerevisiae TPP 2-oxo acid decarboxylases (GSE9590) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2007-11-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 112,020
(9,335 x 12) 		12 by_platform
by_series
6 Control of glycolytic enzyme fluxes in Saccharomyces cerevisiae (GSE9232) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2007-10-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 84,015
(9,335 x 9) 		9 by_platform
by_series
7 A SAGA-Independent Function of SPT3 Mediates Transcriptional Deregulation in a Mutant of the Ccr4-Not Complex (GSE9432) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Geneva 2007-10-25 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 74,680
(9,335 x 8) 		8 by_platform
by_series
8 Upf1p-associated transcripts in S. cerevisiae (GSE9486) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Massachusetts Medical School 2007-10-31 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 74,680
(9,335 x 8) 		8 by_platform
by_series
9 Changes in gene expression in response to heme deficiency and hypoxia (GSE9514) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) National Institutes of health 2007-11-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 74,680
(9,335 x 8) 		8 by_platform
by_series
10 A perturbation in the system leads to period doubling (GSE9302) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Beckman Research Institute of the City of Hope 2007-10-11 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 524,544
(10,928 x 48) 		48 by_platform
by_series
11 The Oxidative Stress Response of a Lager Brewing Yeast Strain during Industrial Propagation and Fermentation (GSE9423) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) University of Nottingham 2007-10-24 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 185,776
(10,928 x 17) 		17 by_platform
by_series
12 Transcriptomes for different level of glucose (GSE9217) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Korea University 2007-10-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 131,136
(10,928 x 12) 		12 by_platform
by_series
13 sua5D expression profiles (GSE9985) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Shanghai institutes for biology sciences 2007-12-20 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 109,280
(10,928 x 10) 		10 by_platform
by_series
14 Comparisons of yeast strains containing the essential histone acetyltransferase, ESA1 or a bypass suppressor of ESA1 (GSE9840) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Boston University School of Medicine 2007-12-11 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 87,424
(10,928 x 8) 		8 by_platform
by_series
15 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat (GSE9915) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) USDA 2007-12-17 Triticum aestivum
Triticum aestivum		 2,206,440
(61,290 x 36) 		36 by_platform
by_series
16 Genotypic differences in water soluble carbohydrate metabolism in stem (GSE9767) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) CSIRO 2007-12-04 Triticum aestivum
Triticum aestivum		 980,640
(61,290 x 16) 		16 by_platform
by_series
17 Tomato wild type, vector control and transgenic lines expressing InsP 5-ptase: mature fruits, root tips, and leaves (GSE9683) [GeneChip] [Tomato] Affymetrix Tomato Genome Array (GPL4741) North Carolina State University 2007-11-26 Solanum lycopersicum
Solanum lycopersicum		 408,360
(10,209 x 40) 		16 24 by_platform
by_series
18 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance (GSE9687) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Virginia Tech 2007-11-26 Glycine max
Glycine max		 9,787,200
(61,170 x 160) 		160 by_platform
by_series
19 Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans (GSE9374) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) McGill University 2007-10-18 Glycine max
Glycine max		 1,529,250
(61,170 x 25) 		25 by_platform
by_series
20 Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression. (GSE9730) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) McGill University 2007-11-29 Glycine max
Glycine max		 367,020
(61,170 x 6) 		6 by_platform
by_series
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