Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(365)		   Primates
(4)		   Rodents
(305)		   Mammals
(19)		   Vertebrates
(21)		   Invertebrates
(59)		   Plants
(125)		   Bacteria
(66)		   Viruses
(3)		   Phages
(0)		   Unclassified
(11)		   All
(979)		  
  SAGE NlaIII
(3)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(39)		   Tiling Array
(13)		   cDNA Array
(26)		   Oligo Array
(32)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(9)		   Other
(1)		   All
(125)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Saccharomyces cerevisiae chemostat steady state microarray compendium (GSE11452) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2008-05-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 1,586,950
(9,335 x 170) 		170 by_platform
by_series
2 TheRole of Rad23/Rad4 protein complex in transcription and DNA repair in yeast (GSE11871) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Cardiff 2008-06-24 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 112,020
(9,335 x 12) 		12 by_platform
by_series
3 Cooperation of two mRNA-binding proteins drives metabolic adaptation to iron deficiency (GSE11236) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Duke University 2008-04-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 84,015
(9,335 x 9) 		9 by_platform
by_series
4 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation (GSE11651) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) University of Stellenbosch 2008-06-03 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 469,904
(10,928 x 43) 		43 by_platform
by_series
5 Identification of histone codes and crosstalk in fission yeast (GSE11511) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Karolinska Inst 2008-05-20 Schizosaccharomyces pombe
Schizosaccharomyces pombe		 76,496
(10,928 x 7) 		7 by_platform
by_series
6 Comparison of yeast (Saccharomyces cerevisiae) strain with histone H4 R45 mutated to H with wild type yeast strain WY139 (GSE11282) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Washington State University 2008-04-28 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 65,568
(10,928 x 6) 		6 by_platform
by_series
7 Alpha-factor treatment of Saccharomyces cerevisiae (GSE11412) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) University of Washington 2008-05-11 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 21,856
(10,928 x 2) 		2 by_platform
by_series
8 Expression data from cold treated wheat cultivars (GSE11774) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) Bristol University 2008-06-12 Triticum aestivum
Triticum aestivum		 2,574,180
(61,290 x 42) 		42 by_platform
by_series
9 Expression data in individual grape berries during ripening initation (GSE11406) [GeneChip] [Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array (GPL1320) The University of British Columbia 2008-05-09 Vitis vinifera
Vitis vinifera		 531,264
(16,602 x 32) 		32 by_platform
by_series
10 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes (GSE11857) [GeneChip] [Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array (GPL1320) INRA 2008-06-23 Vitis rotundifolia
Vitis rotundifolia		 199,224
(16,602 x 12) 		12 by_platform
by_series
11 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae (GSE11611) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Virginia Tech 2008-05-29 Glycine max
Glycine max		 154,270,740
(61,170 x 2,522) 		6 2,516 by_platform
by_series
12 Identification of genomic regions regulated by the Xrn1 and Upf1 proteins (GSE11621) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) UCLA 2008-05-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 12
(0 x 12) 		12 by_platform
by_series
13 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays (GSE11800) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 4
(0 x 4) 		4 by_platform
by_series
14 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing (GSE11802) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 4
(0 x 4) 		4 by_platform
by_series
15 DNA interactions with the ribosomal enhancer (GSE11340) [Tiling Array] [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (GPL7250) Massey University 2008-05-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 2
(0 x 2) 		2 by_platform
by_series
16 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays (GSE11800) [Tiling Array] [Sc03b_MF] Affymetrix GeneChip S. cerevisiae Tiling 1.0F Array (GPL7249) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 4
(0 x 4) 		4 by_platform
by_series
17 Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing (GSE11802) [Tiling Array] [Sc03b_MF] Affymetrix GeneChip S. cerevisiae Tiling 1.0F Array (GPL7249) Stanford University 2008-06-16 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 4
(0 x 4) 		4 by_platform
by_series
18 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection (GSE11025) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Fujian Agriculture and Forestry University 2008-04-02 Oryza sativa
Oryza sativa		 688,572
(57,381 x 12) 		12 by_platform
by_series
19 Comparison of transcriptome profile between wild-type and dst mutant plants (GSE11175) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) Shanghai Institute of Plant Physiology and Ecology 2008-04-15 Oryza sativa
Oryza sativa		 344,286
(57,381 x 6) 		6 by_platform
by_series
20 Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize) (GSE11531) [GeneChip] [Maize] Affymetrix Maize Genome Array (GPL4032) INRA 2008-05-22 Zea mays
Zea mays		 70,936
(17,734 x 4) 		1 3 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [7]
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