Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(0)		   Primates
(0)		   Rodents
(0)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(0)		   Plants
(8)		   Bacteria
(0)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(8)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(3)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(5)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(8)		  
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays (GSE15071) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) International Rice Research Institute 2009-03-03 Oryza sativa Indica Group
Oryza sativa Indica Group		 975,477
(57,381 x 17) 		17 by_platform
by_series
2 Transcriptome analysis of rice in relation to infection with rice tungro spherical virus (RTSV) (GSE14606) [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) International Rice Research Institute 2009-01-27 Oryza sativa Indica Group
Oryza sativa Indica Group		 90,300
(22,575 x 4) 		4 by_platform
by_series
3 Expression data from IR64 rice transformed with 35S::OsPSTOL1 gene (GSE38871) [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) International Rice Research Institute 2012-06-21 Oryza sativa
Oryza sativa		 459,048
(57,381 x 8) 		8 by_platform
by_series
4 Gene expression from the rice leaf elongation zone of 7th leaf under various soil moisture treatments (GSE41159) [GeneChip] Affymetrix Rice Genome Array [custom affyricechipalt.cdf] (GPL16106) International Rice Research Institute 2012-09-26 Oryza sativa
Oryza sativa		 431,010
(23,945 x 18) 		18 by_platform
by_series
5 Transcript profiling of drought responsiveness in two contrasting rice genotypes during vegetative stage stress (GSE5978) [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) International Rice Research Institute 2006-10-05 Oryza sativa
Oryza sativa		 135,450
(22,575 x 6) 		6 by_platform
by_series
6 Comparative gene expression analysis between virus-susceptible and -resistant rice lines (TW16-4 and -69) (GSE6124) [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) International Rice Research Institute 2006-10-25 Oryza sativa
Oryza sativa		 135,450
(22,575 x 6) 		6 by_platform
by_series
7 Comparative gene expression analysis between virus-susceptible and -resistant rice lines (TW16-1263 and -1029) (GSE6125) [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) International Rice Research Institute 2006-10-25 Oryza sativa
Oryza sativa		 135,450
(22,575 x 6) 		6 by_platform
by_series
8 Comparative gene expression analysis between virus-susceptible and -resistant rice lines (NIL37 and NIL22) (GSE6126) [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) International Rice Research Institute 2006-10-25 Oryza sativa
Oryza sativa		 90,300
(22,575 x 4) 		4 by_platform
by_series
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