Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(229)
  Primates
(2)
  Rodents
(120)
  Mammals
(4)
  Vertebrates
(7)
  Invertebrates
(4)
  Plants
(44)
  Bacteria
(10)
  Viruses
(0)
  Phages
(0)
  Unclassified
(3)
  All
(423)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(11)
  Tiling Array
(2)
  cDNA Array
(21)
  Oligo Array
(8)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(44)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Genetic complexity in yeast transcripts (GSE1990) [cDNA Array] FH_yeast_cDNA (GPL118) Fred Hutchinson Cancer Research Institute 2004-11-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae
1,856,270
(7,085 x 262)
262 by_platform
by_series
2 dSLAM (GSE1838) [Oligo Array] Hopkins Tag Array (GPL1444) Johns Hopkins University School of Medicine 2004-10-12 Saccharomyces cerevisiae
Saccharomyces cerevisiae
519,225
(22,575 x 23)
11 12 by_platform
by_series
3 Simultaneous genotyping, gene expression measurement, and detection of allele-specific expression (GSE1975) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Washington 2004-11-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae
261,380
(9,335 x 28)
28 by_platform
by_series
4 aerobic_to_anaerobic_shift (GSE1879) [Oligo Array] Custom Yeast Genomic 70-mer Oligonucleotide Microarray (GPL1535) University of Illinois at Urbana-Champaign 2004-10-25 Saccharomyces cerevisiae
Saccharomyces cerevisiae
252,765
(5,617 x 45)
45 by_platform
by_series
5 Ifh1 activates RP genes (GSE1934) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Geneva 2004-11-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae
224,040
(9,335 x 24)
24 by_platform
by_series
6 Phosphomannose isomerase gene (PMI40) deletion strain cultivated in varying initial mannose concentrations (GSE1938) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Haartman Institute 2004-11-08 Saccharomyces cerevisiae
Saccharomyces cerevisiae
140,025
(9,335 x 15)
15 by_platform
by_series
7 CEA SGF:E00013#yap1 aft W303a HU response (GSE1914) [cDNA Array] CEA_SGF:AIW (GPL1531) Ecole Normale Supérieure 2004-11-02 Saccharomyces cerevisiae
Saccharomyces cerevisiae
138,240
(6,912 x 20)
20 by_platform
by_series
8 dSLAM (GSE1838) [Oligo Array] Yeast Deletions UpTag array (Rosetta Inpharmatics) (GPL1446) Johns Hopkins University School of Medicine 2004-10-12 Saccharomyces cerevisiae
Saccharomyces cerevisiae
112,752
(18,792 x 6)
5 1 by_platform
by_series
9 Transcriptional effects of the TOR2-controlled signaling function (GSE1814) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Biozentrum University of Basel 2004-10-01 Saccharomyces cerevisiae
Saccharomyces cerevisiae
112,020
(9,335 x 12)
12 by_platform
by_series
10 leu3p dependent transcription (GSE2076) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Delft University of Technology 2004-12-15 Saccharomyces cerevisiae
Saccharomyces cerevisiae
112,020
(9,335 x 12)
12 by_platform
by_series
11 CEA_SGF:E00014#HU_response_long-term (GSE1915) [cDNA Array] CEA_SGF:AIW (GPL1531) Ecole Normale Supérieure 2004-11-02 Saccharomyces cerevisiae
Saccharomyces cerevisiae
110,592
(6,912 x 16)
16 by_platform
by_series
12 Genome-wide binding of Fhl1 and Ifh1 +/- Rapamycin (GSE1944) [Oligo Array] yeast intergenic array (GPL1695) University of Geneva 2004-11-08 Saccharomyces cerevisiae
Saccharomyces cerevisiae
102,210
(6,814 x 15)
15 by_platform
by_series
13 CEA_SGF:E00015#aft_HU_response (GSE1942) [cDNA Array] CEA_SGF:AIW (GPL1531) Ecole Normale Supérieure 2004-11-08 Saccharomyces cerevisiae
Saccharomyces cerevisiae
82,944
(6,912 x 12)
12 by_platform
by_series
14 dSLAM (GSE1838) [Oligo Array] Yeast Deletions DownTag array (Rosetta Inpharmatics) (GPL1445) Johns Hopkins University School of Medicine 2004-10-12 Saccharomyces cerevisiae
Saccharomyces cerevisiae
74,304
(18,576 x 4)
4 by_platform
by_series
15 Affy data from WT, FHL1 deleted and FHL1,IFH1 double deleted strains. (GSE2096) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Albert Einstein College of Medicine 2004-12-21 Saccharomyces cerevisiae
Saccharomyces cerevisiae
56,010
(9,335 x 6)
6 by_platform
by_series
16 CEA_SGF:E00013#yap1_HU_response (GSE1941) [cDNA Array] CEA_SGF:AIW (GPL1531) Ecole Normale Supérieure 2004-11-08 Saccharomyces cerevisiae
Saccharomyces cerevisiae
55,296
(6,912 x 8)
8 by_platform
by_series
17 Fhl1 and lfh1 ChIP-chip (GSE1930) [cDNA Array] Struhl Lab Yeast Double Intergenic Array (GPL1689) Harvard Medical School 2004-11-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae
51,504
(6,438 x 8)
8 by_platform
by_series
18 Postreplicative recruitment of Cohesin to double-strand breaks (GSE1905) [Tiling Array] SC3456a520015F (GPL1280) The University of Tokyo 2004-10-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae
50,646
(8,441 x 6)
6 by_platform
by_series
19 Response of yeast to tomatidine treatment (GSE1927) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Syngenta 2004-11-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae
28,005
(9,335 x 3)
3 by_platform
by_series
20 yeast hsf1-R206S/F256S mutant (GSE2103) [cDNA Array] GF100 GeneFilters (GPL205) Kanazawa University 2004-12-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae
24,336
(6,084 x 4)
4 by_platform
by_series
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