Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(229)		   Primates
(0)		   Rodents
(120)		   Mammals
(0)		   Vertebrates
(7)		   Invertebrates
(4)		   Plants
(44)		   Bacteria
(10)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(423)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(11)		   Tiling Array
(2)		   cDNA Array
(21)		   Oligo Array
(8)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(44)		  
1   |   2   |   3      »      
Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Simultaneous genotyping, gene expression measurement, and detection of allele-specific expression (GSE1975) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Washington 2004-11-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 261,380
(9,335 x 28) 		28 by_platform
by_series
2 aerobic_to_anaerobic_shift (GSE1879) [Oligo Array] Custom Yeast Genomic 70-mer Oligonucleotide Microarray (GPL1535) University of Illinois at Urbana-Champaign 2004-10-25 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 252,765
(5,617 x 45) 		45 by_platform
by_series
3 Ifh1 activates RP genes (GSE1934) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) University of Geneva 2004-11-05 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 224,040
(9,335 x 24) 		24 by_platform
by_series
4 Genome-wide binding of Fhl1 and Ifh1 +/- Rapamycin (GSE1944) [Oligo Array] yeast intergenic array (GPL1695) University of Geneva 2004-11-08 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 102,210
(6,814 x 15) 		15 by_platform
by_series
5 Transcriptome changes in Emericella nidulans due to oxidative stress - primary experimental data (GSE2100) [cDNA Array] Emericella nidulans EST-based chip primary data (GPL1756) University of Debrecen 2004-12-22 Emericella nidulans
Emericella nidulans		 139,264
(4,352 x 32) 		32 by_platform
by_series
6 Transcriptome changes in Emericella nidulans due to oxidative stress - normalized experimental data (GSE2085) [cDNA Array] Emericella nidulans EST-based chip normalized data (GPL1752) University of Debrecen 2004-12-17 Emericella nidulans
Emericella nidulans		 56,528
(3,533 x 16) 		16 by_platform
by_series
7 primary stem development (GSE2000) [Oligo Array] GBC_FOAR03_0001 (GPL1713) University of British Columbia 2004-11-22 Arabidopsis thaliana
Arabidopsis thaliana		 576,000
(28,800 x 20) 		20 by_platform
by_series
8 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) University of Arizona 2004-11-03 Oryza sativa Japonica Group
Oryza sativa Japonica Group		 506,644
(126,661 x 4) 		4 by_platform
by_series
9 Oryza Sativa and Magnaporthe Grisea LongSAGE (GSE1924) [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea 70-15 (GPL1676) University of Arizona 2004-11-03 Magnaporthe oryzae 70-15
Magnaporthe oryzae 70-15		 51,925
(51,925 x 1) 		1 by_platform
by_series
10 Coffee leaf miner infestation in coffee plants (GSE2045) [cDNA Array] coffee nylon arrays (GPL1730) UNICAMP 2004-12-07 Coffea
Coffea		 18,432
(3,072 x 6) 		6 by_platform
by_series
11 Postreplicative recruitment of Cohesin to double-strand breaks (GSE1905) [Tiling Array] SC3456a520015F (GPL1280) The University of Tokyo 2004-10-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 50,646
(8,441 x 6) 		6 by_platform
by_series
12 Postreplicative recruitment of Cohesin to double-strand breaks (GSE1905) [Tiling Array] rikDacFC6 (GPL347) The University of Tokyo 2004-10-30 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 7,938
(882 x 9) 		9 by_platform
by_series
13 The Role of Stationary Phase in Gene Regulation and Mating Competence in Candida albicans (GSE1969) [Oligo Array] Soll albicans (GPL1519) The University of Iowa 2004-11-12 Candida albicans
Candida albicans		 423,360
(14,112 x 30) 		30 by_platform
by_series
14 Response of yeast to tomatidine treatment (GSE1927) [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) Syngenta 2004-11-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 28,005
(9,335 x 3) 		3 by_platform
by_series
15 Comparative transcriptome analysis of early interaction events in Scots pine root tissues following challenge (1dpi) (GSE2089) [cDNA Array] Pinus taeda cDNA (GPL1508) North Carolina State University 2004-12-20 Pinus sylvestris
Pinus sylvestris		 331,344
(9,204 x 36) 		36 by_platform
by_series
16 Overexpression of miR159a (GSE2078) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Max Planck Institute 2004-12-16 Arabidopsis thaliana
Arabidopsis thaliana		 136,860
(22,810 x 6) 		6 by_platform
by_series
17 Overexpression of miR156b and miR164b (floral apex) (GSE2079) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Max Planck Institute 2004-12-16 Arabidopsis thaliana
Arabidopsis thaliana		 136,860
(22,810 x 6) 		6 by_platform
by_series
18 Overexpression of miR164b and 172a (vegetative apex) (GSE2080) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Max Planck Institute 2004-12-16 Arabidopsis thaliana
Arabidopsis thaliana		 136,860
(22,810 x 6) 		6 by_platform
by_series
19 Overexpression of miR319a (SD Leaves) (GSE2081) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Max Planck Institute 2004-12-16 Arabidopsis thaliana
Arabidopsis thaliana		 91,240
(22,810 x 4) 		4 by_platform
by_series
20 yeast hsf1-R206S/F256S mutant (GSE2103) [cDNA Array] GF100 GeneFilters (GPL205) Kanazawa University 2004-12-22 Saccharomyces cerevisiae
Saccharomyces cerevisiae		 24,336
(6,084 x 4) 		4 by_platform
by_series
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