Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(743)
  Primates
(5)
  Rodents
(386)
  Mammals
(31)
  Vertebrates
(51)
  Invertebrates
(187)
  Plants
(209)
  Bacteria
(89)
  Viruses
(1)
  Phages
(0)
  Unclassified
(12)
  All
(1,715)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(65)
  Tiling Array
(15)
  cDNA Array
(20)
  Oligo Array
(56)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(49)
  Other
(0)
  All
(209)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 [hexa-] Transcriptomic changes in synthetic hexaploid wheat (GSE20169) [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) INRA 2010-02-03 Triticum aestivum
Triticum aestivum
1,103,220
(61,290 x 18)
18 by_platform
by_series
2 Yeast genomic DNA: SH6484 vs. FY834 (GSE19876) [Oligo Array] 3D-Gene Yeast Oligo chip S.cerevisiae 6k (GPL4399) Toray Industries, Inc. 2010-01-13 Saccharomyces cerevisiae
Saccharomyces cerevisiae
5,802
(5,802 x 1)
1 by_platform
by_series
3 upregulation of transcripts in the absence of prc2 repressory complex-Dissecting the role of the polycomb repressor (GSE19851) [cDNA Array] URGV Arabidopsis thaliana 34.6K CATMA_v5 (GPL9553) INRA 2010-01-12 Arabidopsis thaliana
Arabidopsis thaliana
415,764
(34,647 x 12)
12 by_platform
by_series
4 Understanding the complexity of fruit ripening by transcriptome analysis of rin mutant fruit (GSE20720) [GeneChip] [Tomato] Affymetrix Tomato Genome Array (GPL4741) Delhi university 2010-03-10 Solanum lycopersicum
Solanum lycopersicum
183,762
(10,209 x 18)
18 by_platform
by_series
5 Trichoderma virens transcript levels during mycoparasitism (GSE19832) [Tiling Array] ENS SGDB Trichoderma virens Tv10_Tiling93_1 (GPL9893) École Normale Supérieure 2010-01-11 Hypocrea virens
Hypocrea virens
2,492,232
(415,372 x 6)
6 by_platform
by_series
6 Transcriptome sequencing and comparative transcriptome analysis of the scleroglucan producer Sclerotium rolfsii (GSE21040) [HT Sequencing] 44K multiplex chip, Agilent (Tailor-made microarray, condensed version) (GPL10247) Technische Universität München 2010-03-24 Athelia rolfsii
Athelia rolfsii
109,690
(21,938 x 5)
5 by_platform
by_series
7 Transcriptome reorganization during wood maturation in Pinus radiata (GSE20535) [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) CSIRO 2010-02-25 Pinus radiata
Pinus radiata
221,184
(18,432 x 12)
4 8 by_platform
by_series
8 Transcriptome profie of rice in response to temperature and oxidative stress (GSE19983) [cDNA Array] DPMB/AG Lab Agilent Rice array (4x44K) AMADID No. 15241 (GPL9956) University of Delhi South Campus 2010-01-21 Oryza sativa Indica Group
Oryza sativa Indica Group
890,778
(42,418 x 21)
21 by_platform
by_series
9 Transcriptome changes in soybean seeds resulting from RNAi suppression of seed storage proteins (GSE21116) [HT Sequencing] Illumina Genome Analyzer (Glycine max) (GPL10267) USDA/ARS 2010-03-29 Glycine max
Glycine max
2
(0 x 2)
2 by_platform
by_series
10 Transcriptional responses of allotetraploid cotton species to salt stress (GSE19966) [Oligo Array] Cotton_oligonucleotide_array_v2.0 (GPL4808) University of Georgia 2010-01-20 Gossypium barbadense
Gossypium barbadense
874,368
(24,288 x 36)
18 18 by_platform
by_series
11 Transcriptional response of Candida dubliniensis during hypha formation and environmental change (GSE20537) [Oligo Array] Agilent Candida dubliniensis 12K V.2 (GPL10110) Dublin Dental School and Hospital 2010-02-25 Candida dubliniensis
Candida dubliniensis
385,088
(12,034 x 32)
12 20 by_platform
by_series
12 Transcriptional profiling of the yeast forkhead transcription factor Hcm1 (GSE20420) [cDNA Array] Yeast_16p_DNA_Feb_2010 (GPL10039) Universitat de Lleida 2010-02-19 Saccharomyces cerevisiae
Saccharomyces cerevisiae
74,220
(6,185 x 12)
12 by_platform
by_series
13 Transcriptional profiling of an Fd-GOGAT1/GLU1 mutant in Arabidopsis thaliana (GSE20493) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Norwegian University of Science and Technology 2010-02-23 Arabidopsis thaliana
Arabidopsis thaliana
364,960
(22,810 x 16)
8 8 by_platform
by_series
14 Transcriptional profiles underlying parent-of-origin effects in seeds of Arabidopsis thaliana (GSE20007) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) King's College London 2010-01-22 Arabidopsis thaliana
Arabidopsis thaliana
296,530
(22,810 x 13)
13 by_platform
by_series
15 Transcriptional profiles underlying parent-of-origin effects in seeds of Arabidopsis thaliana (GSE20007) [Oligo Array] Custom Arabidopsis 22K 60-mer oligo array (GPL9964) King's College London 2010-01-22 Arabidopsis thaliana
Arabidopsis thaliana
210,800
(21,080 x 10)
10 by_platform
by_series
16 Transcriptional profiles uncover Aspergillus flavus induced resistance in mature maize kernels (GSE19883) [Oligo Array] Maize oligonucleotide array 46K version (GPL6438) SRRC, USDA-ARS 2010-01-13 Zea mays
Zea mays
738,048
(46,128 x 16)
8 8 by_platform
by_series
17 Transcription comparison of UC26 to wild type G217B (GSE19762) [Oligo Array] UCSF/Sil lab-Histoplasma capsulatum-G217Bprint2 (GPL6125) University of Cincinnati 2010-01-06 Ajellomyces capsulatus
Ajellomyces capsulatus
14,962
(14,962 x 1)
1 by_platform
by_series
18 Transcript profiling of tomato mutants producing anthocyanins in the fruit (GSE19792) [GeneChip] [Tomato] Affymetrix Tomato Genome Array (GPL4741) Sant'Anna School of Advanced Studies 2010-01-07 Solanum lycopersicum
Solanum lycopersicum
81,672
(10,209 x 8)
8 by_platform
by_series
19 Transcript profiling of auxin/cytokinin crosstalk in the Arabidopsis primary root apex (GSE20231) [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) Nottingham Arabidopsis Stock Centre (NASC) 2010-02-09 Arabidopsis thaliana
Arabidopsis thaliana
319,340
(22,810 x 14)
14 by_platform
by_series
20 Tomato root transcriptome response to a nitrogen-enriched soil patch (GSE21020) [GeneChip] [Tomato] Affymetrix Tomato Genome Array (GPL4741) Donald Danforth Plant Science Center 2010-03-23 Solanum lycopersicum
Solanum lycopersicum
91,881
(10,209 x 9)
9 by_platform
by_series
1   |   2   |   3   |   4   |   5      »      [11]