Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,814)
  Primates
(64)
  Rodents
(344)
  Mammals
(0)
  Vertebrates
(4)
  Invertebrates
(78)
  Plants
(156)
  Bacteria
(477)
  Viruses
(0)
  Phages
(0)
  Unclassified
(9)
  All
(3,946)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(80)
  Tiling Array
(21)
  cDNA Array
(0)
  Oligo Array
(55)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(156)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(18)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(138)
  all
(156)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM489053 T. reesei NG14 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 1 description:aCGH NG14.1/QM6a.1
2 GSM489054 T. reesei NG14 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 2 description:aCGH NG14.2/QM6a.2
3 GSM489055 T. reesei NG14 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:NG14 QM6a title:T. reesei NG14 replicate 3 description:aCGH NG14.3/QM6a.3
4 GSM489056 T. reesei QM6a replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM6a title:T. reesei QM6a replicate 1 description:aCGH QM6a.1/QM6a.1 self-hybridization
5 GSM489057 T. reesei QM6a replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM6a title:T. reesei QM6a replicate 2 description:aCGH QM6a.2/QM6a.2 self-hybridization
6 GSM489058 T. reesei QM6a replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM6a title:T. reesei QM6a replicate 3 description:aCGH QM6a.3/QM6a.3 self-hybridization
7 GSM489059 T. reesei QM9123 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM9123 QM6a title:T. reesei QM9123 replicate 1 description:aCGH QM9123.1/QM6a.1
8 GSM489060 T. reesei QM9123 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM9123 QM6a title:T. reesei QM9123 replicate 2 description:aCGH QM9123.2/QM6a.2
9 GSM489061 T. reesei QM9414 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 1 description:aCGH QM9414.1/QM6a.1
10 GSM489062 T. reesei QM9414 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 2 description:aCGH QM9414.2/QM6a.2
11 GSM489063 T. reesei QM9414 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:QM9414 QM6a title:T. reesei QM9414 replicate 3 description:aCGH QM9414.3/QM6a.3
12 GSM489064 T. reesei RutC-30 replicate 1 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 1 description:aCGH RutC-30.1/QM6a.1
13 GSM489065 T. reesei RutC-30 replicate 2 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 2 description:aCGH RutC-30.2/QM6a.2
14 GSM489066 T. reesei RutC-30 replicate 3 2,163,898 VTT Technical Research Centre 2009-12-22 [Oligo Array] NimbleGen T. reesei 2.1M HD2 arrayCGH (GPL9821) genomic Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:RutC-30 QM6a title:T. reesei RutC-30 replicate 3 description:aCGH RutC-30.3/QM6a.3
15 GSM322862 Chemostat_D03_01 169,340 VTT Technical Research Centre of Finland 2008-09-22 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.03 title:Chemostat_D03_01 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
16 GSM324921 Chemostat_D03_02 169,340 VTT Technical Research Centre of Finland 2008-09-29 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.03 title:Chemostat_D03_02 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
17 GSM324922 Chemostat_D03_03 169,340 VTT Technical Research Centre of Finland 2008-09-29 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.03 title:Chemostat_D03_03 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
18 GSM324925 Chemostat_D06_01 169,340 VTT Technical Research Centre of Finland 2008-09-29 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.06 title:Chemostat_D06_01 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
19 GSM324926 Chemostat_D06_02 169,340 VTT Technical Research Centre of Finland 2008-09-29 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.06 title:Chemostat_D06_02 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
20 GSM324927 Chemostat_D06_03 169,340 VTT Technical Research Centre of Finland 2008-09-29 [Tiling Array] VTT Technical Research Centre of Finland Trichoderma reesei intergenic 170K tiling version1 (GPL7331) RNA Hypocrea jecorina
Hypocrea jecorina
unclassified source_name:Chemostat growth rate D=0.06 title:Chemostat_D06_03 description:Spare intergenic expression tiling of T. reesei chemostat cultivations
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