Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,442)		   Primates
(0)		   Rodents
(1,098)		   Mammals
(60)		   Vertebrates
(353)		   Invertebrates
(733)		   Plants
(622)		   Bacteria
(276)		   Viruses
(40)		   Phages
(0)		   Unclassified
(9)		   All
(9,633)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(171)		   Tiling Array
(27)		   cDNA Array
(0)		   Oligo Array
(402)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(22)		   Other
(0)		   All
(622)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(10)		   young aerial structure
(6)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(9)		   seed/fruit/grain
(0)		   pooled
(10)		   unclassified
(587)		   all
(622)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM250840 SP cdc10-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe cdc10-HA cells were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP cdc10-HA ChIP-chip sample description:Schizosaccharomyces pombe Cdc10-HA cells Chip DNA vs Schizosaccharomyces pombe cdc10_HA WCE DNA.
2 GSM250841 SP res1-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe res1-HA cells were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP res1-HA ChIP-chip sample description:Schizosaccharomyces pombe res1-HA cells Chip DNA vs Schizosaccharomyces pombe res1_HA WCE DNA.
3 GSM250842 SP res2-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe res2-HA cells were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP res2-HA ChIP-chip sample description:Schizosaccharomyces pombe res1-HA cells Chip DNA vs Schizosaccharomyces pombe res2_HA WCE DNA.
4 GSM250843 SP rep2-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe res1-HA cells were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP rep2-HA ChIP-chip sample description:Schizosaccharomyces pombe rep2-HA cells Chip DNA vs Schizosaccharomyces pombe rep2_HA WCE DNA.
5 GSM250844 SP res1-HA cdc10-v50 ChIP-chip sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe res1-HA cdc10-v50 cells grown at 36°C for 4 hr were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP res1-HA cdc10-v50 ChIP-chip sample description:Schizosaccharomyces pombe res1-HA cdc10-v50 cells Chip DNA vs Schizosaccharomyces pombe res1_HA cdc10-v50 WCE DNA.
6 GSM250845 SP cdc10-HA treated with phenanthroline 15 min sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe cdc10-HA cells treated with phenanthroline for 15 min and were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP cdc10-HA treated with phenanthroline 15 min sample description:Schizosaccharomyces pombe Cdc10-HA cells Chip DNA treated with phenanthroline for 15 min vs Schizosaccharomyces pombe cdc10_HA WCE DNA treated with phenanthroline for 15 min.
7 GSM250846 SP cdc10-HA treated with phenanthroline 60 min sample 372,955 Genome Institute of Singapore 2007-12-16 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces pombe cdc10-HA cells treated with phenanthroline for 60 min and were cross-linked with formaldehyde and subjected to ChIP-chip experiment . Reference DNA was obtained from whole cell extract (WCE). title:SP cdc10-HA treated with phenanthroline 60 min sample description:Schizosaccharomyces pombe Cdc10-HA cells Chip DNA treated with phenanthroline for 60 min vs Schizosaccharomyces pombe cdc10_HA WCE DNA treated with phenanthroline for 60 min.
8 GSM327170 SP Atf1-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Atf1-HA ChIP-chip sample description:Schizosaccharomyces pombe Atf1-HA cells Chip DNA vs Schizosaccharomyces pombe Atf1_HA WCE DNA.
9 GSM327171 SP Atf1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Atf1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample description:Schizosaccharomyces pombe Atf1-HA (treated with 0.5 mM H2O2 for 30min) cells Chip DNA vs Schizosaccharomyces pombe Atf1-HA (treated with 0.5 mM H2O2 for 30min) WCE DNA.
10 GSM327172 SP Pcr1-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Pcr1-HA ChIP-chip sample description:Schizosaccharomyces pombe Pcr1-HA cells Chip DNA vs Schizosaccharomyces pombe Pcr1_HA WCE DNA.
11 GSM327173 SP Pcr1-HA (treated with 0.5mM H2O2 for 30min) ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Pcr1-HA (treated with 0.5mM H2O2 for 30min) ChIP-chip sample description:Schizosaccharomyces pombe Pcr1-HA (treated with 0.5mM H2O2 for 30min) cells Chip DNA vs Schizosaccharomyces pombe Pcr1-HA (treated with 0.5mM H2O2 for 30min) WCE DNA.
12 GSM327174 SP Sty1-HA ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Sty1-HA ChIP-chip sample description:Schizosaccharomyces pombe Sty1-HA cells Chip DNA vs Schizosaccharomyces pombe Sty1-HA WCE DNA.
13 GSM327175 SP Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample description:Schizosaccharomyces pombe Sty1-HA (treated with 0.5 mM H2O2 for 30min) cells Chip DNA vs Schizosaccharomyces pombe Sty1-HA (treated with 0.5 mM H2O2 for 30min) WCE DNA.
14 GSM327176 SP Atf1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Atf1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample description:Schizosaccharomyces pombe Atf1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) cells Chip DNA vs Schizosaccharomyces pombe Atf1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) WCE DNA.
15 GSM327177 SP Pcr1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample 372,955 Genome Institute of Singapore 2008-10-06 [Tiling Array] S. pombe Nimblegen tiling array (GPL6279) genomic Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Fission yeast cells title:SP Pcr1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) ChIP-chip sample description:Schizosaccharomyces pombe Pcr1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) cells Chip DNA vs Schizosaccharomyces pombe Pcr1 deletion Sty1-HA (treated with 0.5 mM H2O2 for 30min) WCE DNA.
16 GSM898817 Keller 0hr sucrose repeat I 45,220 National University of Singapore 2012-03-21 [Oligo Array] Agilent-029031 Sorghum bicolor 44K TLL_JSY_V1.1 022520 (GPL15369) RNA Sorghum bicolor
Sorghum bicolor		 unclassified source_name:Keller 0hr Repeat I title:Keller 0hr sucrose repeat I description:Gene expression after 0hr in 5% sucrose solution
17 GSM898818 Keller 2hr sucrose repeat I 45,220 National University of Singapore 2012-03-21 [Oligo Array] Agilent-029031 Sorghum bicolor 44K TLL_JSY_V1.1 022520 (GPL15369) RNA Sorghum bicolor
Sorghum bicolor		 unclassified source_name:Keller 2hr Repeat I title:Keller 2hr sucrose repeat I description:Gene expression after 2hr in 5% sucrose solution
18 GSM898819 Keller 6hr sucrose repeat I 45,220 National University of Singapore 2012-03-21 [Oligo Array] Agilent-029031 Sorghum bicolor 44K TLL_JSY_V1.1 022520 (GPL15369) RNA Sorghum bicolor
Sorghum bicolor		 unclassified source_name:Keller 6hr Repeat I title:Keller 6hr sucrose repeat I description:Gene expression after 6hr in 5% sucrose solution
19 GSM898820 BTX623 0hr sucrose repeat I 45,220 National University of Singapore 2012-03-21 [Oligo Array] Agilent-029031 Sorghum bicolor 44K TLL_JSY_V1.1 022520 (GPL15369) RNA Sorghum bicolor
Sorghum bicolor		 unclassified source_name:BTX623 0hr Repeat I title:BTX623 0hr sucrose repeat I description:Gene expression after 0hr in 5% sucrose solution
20 GSM898821 BTX623 2hr sucrose repeat I 45,220 National University of Singapore 2012-03-21 [Oligo Array] Agilent-029031 Sorghum bicolor 44K TLL_JSY_V1.1 022520 (GPL15369) RNA Sorghum bicolor
Sorghum bicolor		 unclassified source_name:BTX623 2hr Repeat I title:BTX623 2hr sucrose repeat I description:Gene expression after 2hr in 5% sucrose solution
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