Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(14,410)
  Primates
(143)
  Rodents
(2,709)
  Mammals
(1,046)
  Vertebrates
(348)
  Invertebrates
(428)
  Plants
(2,170)
  Bacteria
(357)
  Viruses
(0)
  Phages
(0)
  Unclassified
(40)
  All
(21,651)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(3)
  GeneChip
(391)
  Tiling Array
(71)
  cDNA Array
(888)
  Oligo Array
(758)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(42)
  Other
(0)
  All
(2,170)
 
  brain
(0)
  blood
(13)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(146)
  young aerial structure
(205)
  root
(43)
  meristem/growing tissue
(77)
  flower/sexual organ
(5)
  seed/fruit/grain
(107)
  pooled
(105)
  unclassified
(1,469)
  all
(2,170)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM346479 MS-G2 384,659 Universidad de Salamanca 2008-11-26 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium in the presence of glucose title:MS-G2 description:Biological replicate 2 of 2
2 GSM346692 MS-1 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium title:MS-1 description:Biological replicate 1 of 2
3 GSM346694 MS-G1 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium in the presence of glucose title:MS-G1 description:Biological replicate 1 of 2
4 GSM346695 MS-Q1 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium in the presence of chitin title:MS-Q1 description:Biological replicate 1 of 2
5 GSM346697 MS-P2 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium interacting with tomato plants title:MS-P2 description:Biological replicate 2 of 2
6 GSM346698 MS-2 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium title:MS-2 description:Biological replicate 2 of 2
7 GSM346700 MS-P1 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium interacting with tomato plants title:MS-P1 description:Biological replicate 1 of 2
8 GSM346702 MS-Q2 384,659 Universidad de Salamanca 2008-12-01 [Oligo Array] Trichoderma spp. HDO microarray (GPL7702) RNA Hypocrea lixii
Hypocrea lixii
unclassified source_name:Trichoderma harzianum CECT 2413 grown in liquid basal medium in the presence of chitin title:MS-Q2 description:Biological replicate 2 of 2
9 GSM669402 Endogenous sRNAs from growing buds of O. europaea (PicualxArbequina genetic cross)_growing (juvenile) stage 73,277 Centro de Investigaciones Biológicas 2011-02-05 [HT Sequencing] 454 GS FLX (Olea europaea) (GPL13125) SRA Olea europaea
Olea europaea
meristem/growing tissue Growing lateral buds, Picual x Arbequina olive variety
10 GSM758752 Control 30', biological rep1 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
11 GSM758753 Control 30', biological rep2 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
12 GSM758754 Control 30', biological rep3 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
13 GSM758755 Elicitor 30', biological rep1 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Elicitor treated Leaves
14 GSM758756 Elicitor 30', biological rep2 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Elicitor treated Leaves
15 GSM758757 Elicitor 30', biological rep3 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Elicitor treated Leaves
16 GSM758758 Control 2h, biological rep1 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
17 GSM758759 Control 2h, biological rep2 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
18 GSM758760 Control 2h, biological rep3 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Control Leaves
19 GSM758761 Elicitor 2h, biological rep1 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Elicitor treated Leaves
20 GSM758762 Elicitor 2h, biological rep2 57,381 Center for Research in Agricultural Genomics (CRAG) 2011-07-12 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa Japonica Group
Oryza sativa Japonica Group
leaf Elicitor treated Leaves
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