Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,851)		   Primates
(60)		   Rodents
(2,590)		   Mammals
(41)		   Vertebrates
(39)		   Invertebrates
(59)		   Plants
(464)		   Bacteria
(78)		   Viruses
(0)		   Phages
(0)		   Unclassified
(120)		   All
(6,302)		  
  SAGE NlaIII
(5)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(132)		   Tiling Array
(15)		   cDNA Array
(222)		   Oligo Array
(90)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(464)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(23)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(12)		   flower/sexual organ
(6)		   seed/fruit/grain
(0)		   pooled
(76)		   unclassified
(347)		   all
(464)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM34285 OSJNGg 57,668 University of Arizona 2004-11-01 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) SAGE Oryza sativa Japonica Group
Oryza sativa Japonica Group		 leaf 21 days leaf of Oryza sativa subsp. japonica cultivar Nipponbare
2 GSM34286 MG_SGa 51,925 University of Arizona 2004-11-01 [SAGE NlaIII] SAGE:17:NlaIII:Magnaporthe grisea 70-15 (GPL1676) SAGE Magnaporthe oryzae 70-15
Magnaporthe oryzae 70-15		 pooled 3 days old mycelia from Magnaporthe grisea (strain 70-15)
3 GSM34284 OSJNGf 36,034 University of Arizona 2004-11-01 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) SAGE Oryza sativa Japonica Group
Oryza sativa Japonica Group		 leaf 21 days leaf of Oryza sativa subsp. japonica cultivar Nipponbare
4 GSM34282 OSJNGb 31,025 University of Arizona 2004-11-01 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (japonica cultivar-group) (GPL775) SAGE Oryza sativa Japonica Group
Oryza sativa Japonica Group		 leaf 21 days leaf of Oryza sativa subsp. japonica cultivar Nipponbare
5 GSM35565 0-3cm/0-2cm - rep1 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2cm from the tip of inflorescence stems totalling 5cm in length (reference, Cy3) 0-3cm from the tip of inflorescence stems totalling 10cm in length (sample, Cy5)
6 GSM35567 0-3cm/0-2cm - rep2 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2cm from the tip of inflorescence stems totalling 5cm in length (reference, Cy3) 0-3cm from the tip of inflorescence stems totalling 10cm in length (sample, Cy5)
7 GSM35568 0-3cm/0-2cm - rep3 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2cm from the tip of inflorescence stems totalling 5cm in length (reference, Cy5) 0-3cm from the tip of inflorescence stems totalling 10cm in length (sample, Cy3)
8 GSM35569 0-3cm/0-2cm - rep4 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2cm from the tip of inflorescence stems totalling 5cm in length (reference, Cy5) 0-3cm from the tip of inflorescence stems totalling 10cm in length (sample, Cy3)
9 GSM35570 2-4cm/0-2cm - rep1 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 2-4 cm from the tip of inflorescence stems totalling 5 cm in length (sample, Cy5)
10 GSM35571 2-4cm/0-2cm - rep2 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 2-4 cm from the tip of inflorescence stems totalling 5 cm in length (sample, Cy5)
11 GSM35721 2-4cm/0-2cm - rep3 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 2-4 cm from the tip of inflorescence stems totalling 5 cm in length (sample, Cy3)
12 GSM35725 2-4cm/0-2cm - rep4 28,800 University of British Columbia 2004-11-19 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 2-4 cm from the tip of inflorescence stems totalling 5 cm in length (sample, Cy3)
13 GSM35726 3-5cm/0-2cm - rep1 28,800 University of British Columbia 2004-11-20 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 3-5 cm from the tip of inflorescence stems totalling 5 cm in length (sample, Cy5)
14 GSM35727 3-5cm/0-2cm - rep2 28,800 University of British Columbia 2004-11-20 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 3-5 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy5)
15 GSM35728 3-5cm/0-2cm - rep3 28,800 University of British Columbia 2004-11-20 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 3-5 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy3)
16 GSM35729 3-5cm/0-2cm - rep4 28,800 University of British Columbia 2004-11-20 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 3-5 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy3)
17 GSM35978 5-7cm/0-2cm - rep1 28,800 University of British Columbia 2004-11-23 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 5-7 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy3)
18 GSM36004 5-7cm/0-2cm - rep2 28,800 University of British Columbia 2004-11-23 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 5-7 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy5)
19 GSM36011 5-7cm/0-2cm - rep3 28,800 University of British Columbia 2004-11-23 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy5) 5-7 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy3)
20 GSM36012 5-7cm/0-2cm - rep4 28,800 University of British Columbia 2004-11-23 [Oligo Array] GBC_FOAR03_0001 (GPL1713) RNA Arabidopsis thaliana
Arabidopsis thaliana		 pooled 0-2 cm from the tip of inflorescence stems totalling 5 cm in length (reference, Cy3) 5-7 cm from the tip of inflorescence stems totalling 10 cm in length (sample, Cy5)
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