Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(26,629)

Invertebrates
(2,131)

Plants
(2,683)

Phages
(0)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(192)

Other
(0)

All
(2,683)

brain
(0)

blood
(11)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(4)

adult aerial structure
(524)

young aerial structure
(172)

root
(153)

meristem/growing tissue
(29)

flower/sexual organ
(142)

seed/fruit/grain
(197)

pooled
(267)

unclassified
(1,184)

all
(2,683)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM648139	Oryza sativa L. ssp. japonica zhonghua11_HT panicle sRNA	5,530,539	Institute of Genetics and Developmental Biology	2011-01-03	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	other flower/sexual organ	young panicles (4cm)
2	GSM648141	Oryza sativa L. ssp. japonica zhonghua11_LT panicle sRNA	5,321,168	Institute of Genetics and Developmental Biology	2011-01-03	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	other flower/sexual organ	young panicles (4cm)
3	GSM648140	Oryza sativa L. ssp. japonica rdr701-1_HT panicle sRNA	4,952,454	Institute of Genetics and Developmental Biology	2011-01-03	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	other flower/sexual organ	young panicles (4cm)
4	GSM648142	Oryza sativa L. ssp. japonica rdr701-1_LT panicle sRNA	4,621,649	Institute of Genetics and Developmental Biology	2011-01-03	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	other flower/sexual organ	young panicles (4cm)
5	GSM686040	Calli_Differentiated	3,641,248	Institut de GÃƒÂ©nÃƒÂ©tique et Microbiologie	2011-03-04	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	unclassified	source_name:Differentiated calli title:Calli_Differentiated
6	GSM686039	Calli_Undifferentiated	3,499,831	Institut de GÃƒÂ©nÃƒÂ©tique et Microbiologie	2011-03-04	[HT Sequencing] Illumina Genome Analyzer (Oryza sativa) (GPL9147)	SRA	Oryza sativa	unclassified	source_name:Undifferentiated calli title:Calli_Undifferentiated
7	GSM675616	wheat_leaf_insensitive_0H	1,285,724	China Agricultrual University	2011-02-15	[HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467)	SRA	Triticum aestivum	leaf	wheat young leaf
8	GSM675617	wheat_leaf_insensitive_1H	1,155,797	China Agricultrual University	2011-02-15	[HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467)	SRA	Triticum aestivum	leaf	wheat young leaf
9	GSM675613	wheat leaf_S_12H	960,422	China Agricultrual University	2011-02-15	[HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467)	SRA	Triticum aestivum	leaf	wheat young leaf
10	GSM675614	wheat_leaf_R_0H	517,052	China Agricultrual University	2011-02-15	[HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467)	SRA	Triticum aestivum	leaf	wheat young leaf
11	GSM661298	s5_ago104 Ovaries	404,542	IRD	2011-01-25	[HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141)	SRA	Zea mays	unclassified	source_name:ago104_KO title:s5_ago104 Ovaries
12	GSM648401	Ectomycorrhizal root tip P.trichocarpa 1	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus trichocarpa	pooled	Ectomycorrhizal root tip P.trichocarpa 1
13	GSM648403	Ectomycorrhizal root tip P.trichocarpa 2	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus trichocarpa	pooled	Ectomycorrhizal root tip P.trichocarpa 2
14	GSM648405	Ectomycorrhizal root tip P.trichocarpa 3	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus trichocarpa	pooled	Ectomycorrhizal root tip P.trichocarpa 3
15	GSM648408	Ectomycorrhizal root tip P.deltoides 1	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus deltoides	pooled	Ectomycorrhizal root tip P.deltoides 1
16	GSM648411	Ectomycorrhizal root tip P.deltoides 2	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus deltoides	pooled	Ectomycorrhizal root tip P.deltoides 2
17	GSM648414	Ectomycorrhizal root tip P.deltoides 3	388,340	INRA	2011-01-04	[Oligo Array] Populus 2.0 (GPL2699)	RNA	Populus deltoides	pooled	Ectomycorrhizal root tip P.deltoides 3
18	GSM661297	s3_WildType Ovaries	386,281	IRD	2011-01-25	[HT Sequencing] Illumina Genome Analyzer (Zea mays) (GPL9141)	SRA	Zea mays	unclassified	source_name:wild-type title:s3_WildType Ovaries
19	GSM675615	wheat_leaf_R_12H	319,337	China Agricultrual University	2011-02-15	[HT Sequencing] Illumina Genome Analyzer (Triticum aestivum) (GPL10467)	SRA	Triticum aestivum	leaf	wheat young leaf
20	GSM694157	untagged wild type sample replicate #1	243,504	UC San Francisco	2011-03-21	[Tiling Array] Cryptococcus neoformans 243K tiling chip (GPL13228)	genomic	Cryptococcus neoformans	unclassified	source_name:untagged wild type sample replicate #1 whole cell extract title:untagged wild type sample replicate #1 description:untagged wild type sample replicate #1 Median of Ratios (635/532)

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