Gene Expression Omnibus (GEO) Overview

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DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Human
(241)

Primates
(0)

Rodents
(207)

Mammals
(0)

Vertebrates
(0)

Invertebrates
(0)

Plants
(63)

Bacteria
(68)

Viruses
(0)

Phages
(0)

Unclassified
(0)

All
(579)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(0)

Tiling Array
(0)

cDNA Array
(35)

Oligo Array
(28)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(0)

Other
(0)

All
(63)

brain
(0)

blood
(0)

connective
(0)

reproductive
(0)

muscular
(0)

digestive
(0)

liver
(0)

lung
(0)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(35)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(8)

unclassified
(20)

all
(63)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM945759	Mixed_22h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 22 h, replicate 1 title:Mixed_22h_rep1 description:Gene expression after 22 h in S. cerevisiae from mixed fermentation
2	GSM945760	Mixed_92h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 92 h, replicate 1 title:Mixed_92h_rep1 description:Gene expression after 92 h in S. cerevisiae from mixed fermentation
3	GSM945761	Mixed_144h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 144 h, replicate 1 title:Mixed_144h_rep1 description:Gene expression after 144 h in S. cerevisiae from mixed fermentation
4	GSM945762	Mixed_187h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 187 h, replicate 1 title:Mixed_187h_rep1 description:Gene expression after 187 h in S. cerevisiae from mixed fermentation
5	GSM945763	Control_22h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 22 h, replicate 1 title:Control_22h_rep1 description:Gene expression after 22 h in S. cerevisiae from control mono fermentation
6	GSM945764	Control_92h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 92 h, replicate 1 title:Control_92h_rep1 description:Gene expression after 92 h in S. cerevisiae from control mono fermentation
7	GSM945765	Control_144h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 144 h, replicate 1 title:Control_144h_rep1 description:Gene expression after 144 h in S. cerevisiae from control mono fermentation
8	GSM945766	Control_187h_rep1	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 187 h, replicate 1 title:Control_187h_rep1 description:Gene expression after 187 h in S. cerevisiae from control mono fermentation
9	GSM945767	Mixed_22h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 22 h, replicate 2 title:Mixed_22h_rep2 description:Gene expression after 22 h in S. cerevisiae from mixed fermentation
10	GSM945768	Mixed_92h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 92 h, replicate 2 title:Mixed_92h_rep2 description:Gene expression after 92 h in S. cerevisiae from mixed fermentation
11	GSM945769	Mixed_144h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 144 h, replicate 2 title:Mixed_144h_rep2 description:Gene expression after 144 h in S. cerevisiae from mixed fermentation
12	GSM945770	Mixed_187h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:Mixed fermentation, 187 h, replicate 2 title:Mixed_187h_rep2 description:Gene expression after 187 h in S. cerevisiae from mixed fermentation
13	GSM945771	Control_22h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 22 h, replicate 2 title:Control_22h_rep2 description:Gene expression after 22 h in S. cerevisiae from control mono fermentation
14	GSM945772	Control_92h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 92 h, replicate 2 title:Control_92h_rep2 description:Gene expression after 92 h in S. cerevisiae from control mono fermentation
15	GSM945773	Control_144h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 144 h, replicate 2 title:Control_144h_rep2 description:Gene expression after 144 h in S. cerevisiae from control mono fermentation
16	GSM945774	Control_187h_rep2	6,256	Biotechnical faculty	2012-06-07	[Oligo Array] [Agilent-016322] Agilent Yeast 8X15K conversion (Probe Name version) (GPL11488)	RNA	Saccharomyces cerevisiae	unclassified	source_name:S. cerevisiae-only fermentation, 187 h, replicate 2 title:Control_187h_rep2 description:Gene expression after 187 h in S. cerevisiae from control mono fermentation
17	GSM590318	Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 1/4.	6,314	Faculty of Medicine, University of Ljubljana	2010-09-03	[Oligo Array] Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version) (GPL9294)	RNA	Saccharomyces cerevisiae	unclassified	source_name:D10 Small 01 pooled WT San I title:Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 1/4. description:Yeast D10 Small 01 Biological replicate 1/4.
18	GSM590319	Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 2/4.	6,314	Faculty of Medicine, University of Ljubljana	2010-09-03	[Oligo Array] Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version) (GPL9294)	RNA	Saccharomyces cerevisiae	unclassified	source_name:D10 Small 02 pooled WT San I title:Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 2/4. description:Yeast D10 Small 02 Biological replicate 2/4.
19	GSM590320	Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 3/4.	6,314	Faculty of Medicine, University of Ljubljana	2010-09-03	[Oligo Array] Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version) (GPL9294)	RNA	Saccharomyces cerevisiae	unclassified	source_name:D10 Small 03 pooled WT San I title:Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 3/4. description:Yeast D10 Small 03 Biological replicate 3/4.
20	GSM590321	Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 4/4.	6,314	Faculty of Medicine, University of Ljubljana	2010-09-03	[Oligo Array] Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version) (GPL9294)	RNA	Saccharomyces cerevisiae	unclassified	source_name:D10 Small 04 pooled WT San I title:Yeast D10 Small cells compared to pooled WT San I cells, biological replicate 4/4. description:Yeast D10 Small 04 Biological replicate 4/4.

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