Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(6,763)		   Primates
(4)		   Rodents
(3,704)		   Mammals
(141)		   Vertebrates
(405)		   Invertebrates
(835)		   Plants
(1,401)		   Bacteria
(717)		   Viruses
(12)		   Phages
(0)		   Unclassified
(14)		   All
(13,996)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(2)		   GeneChip
(376)		   Tiling Array
(125)		   cDNA Array
(807)		   Oligo Array
(88)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(3)		   All
(1,401)		  
  brain
(9)		   blood
(4)		   connective
(6)		   reproductive
(0)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(103)		   young aerial structure
(126)		   root
(24)		   meristem/growing tissue
(33)		   flower/sexual organ
(4)		   seed/fruit/grain
(82)		   pooled
(111)		   unclassified
(899)		   all
(1,401)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM117357 Schizosaccharomyces Pombe wild type strain KCl treatment, replicate 2 (slide 17) 11,514 Karolinska Institute 2006-06-30 [cDNA Array] Eurogentec AG S. pombe ORF array 11k (L040B) (GPL3424) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 60min. Schizosaccharomyces Pombe wild type strain Fy368 title:Schizosaccharomyces Pombe wild type strain KCl treatment, replicate 2 (slide 17) description:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 60min compared to non-treated sample at 25C.
2 GSM117358 Schizosaccharomyces Pombe wild type strain KCl treatment 15min, replicate 1 (slide16) 11,514 Karolinska Institute 2006-06-30 [cDNA Array] Eurogentec AG S. pombe ORF array 11k (L040B) (GPL3424) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 15min. Schizosaccharomyces Pombe wild type strain Fy368 title:Schizosaccharomyces Pombe wild type strain KCl treatment 15min, replicate 1 (slide16) description:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 15min compared to non-treated sample at 25C.
3 GSM117359 Schizosaccharomyces Pombe wild type strain KCl treatment 15min, replicate 2 (slide18) 11,514 Karolinska Institute 2006-06-30 [cDNA Array] Eurogentec AG S. pombe ORF array 11k (L040B) (GPL3424) RNA Schizosaccharomyces pombe
Schizosaccharomyces pombe		 unclassified source_name:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 15min. Schizosaccharomyces Pombe wild type strain Fy368 title:Schizosaccharomyces Pombe wild type strain KCl treatment 15min, replicate 2 (slide18) description:Schizosaccharomyces Pombe wild type strain Fy368 treated with 1M KCl for 15min compared to non-treated sample at 25C.
4 GSM116868 nst1-1 nst3-1 #1 vs wild type 22,236 National Institute of Advanced Industrial Science and Technology 2006-06-28 [Oligo Array] Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) (GPL888) RNA Arabidopsis thaliana
Arabidopsis thaliana		 other adult aerial structure Stem of wild type Stem of nst1-1 nst3-1 #1
5 GSM116869 nst1-1 nst3-1 #2 vs wild type 22,236 National Institute of Advanced Industrial Science and Technology 2006-06-28 [Oligo Array] Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) (GPL888) RNA Arabidopsis thaliana
Arabidopsis thaliana		 other adult aerial structure Stem of nst1-1 nst3-1 #2 Stem of wild type
6 GSM116870 nst1-1 nst3-1 #3 vs wild type 22,236 National Institute of Advanced Industrial Science and Technology 2006-06-28 [Oligo Array] Agilent-011839 Arabidopsis 2 Oligo Microarray G4136A (Feature Number version) (GPL888) RNA Arabidopsis thaliana
Arabidopsis thaliana		 other adult aerial structure Stem of wild type Stem of nst1-1 nst3-1 #3
7 GSM116815 wild type, 0% EtOH, 20 g/L glucose, replicate 1 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 0% EtOH, 20 g/L glucose, replicate 1 description:wild type, 0% EtOH, 20 g/L glucose
8 GSM116816 wild type, 0% EtOH, 20 g/L glucose, replicate 2 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 0% EtOH, 20 g/L glucose, replicate 2 description:wild type, 0% EtOH, 20 g/L glucose
9 GSM116817 wild type, 0% EtOH, 20 g/L glucose, replicate 3 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 0% EtOH, 20 g/L glucose, replicate 3 description:wild type, 0% EtOH, 20 g/L glucose
10 GSM116818 mutant spt15, 0% EtOH, 20 g/L glucose, replicate 1 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 0% EtOH, 20 g/L glucose, replicate 1 description:mutant spt15, 0% EtOH, 20 g/L glucose
11 GSM116819 mutant spt15, 0% EtOH, 20 g/L glucose, replicate 2 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 0% EtOH, 20 g/L glucose, replicate 2 description:mutant spt15, 0% EtOH, 20 g/L glucose
12 GSM116820 mutant spt15, 0% EtOH, 20 g/L glucose, replicate 3 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 0% EtOH, 20 g/L glucose, replicate 3 description:mutant spt15, 0% EtOH, 20 g/L glucose
13 GSM116821 wild type, 5% EtOH, 60 g/L glucose, replicate 1 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 5% EtOH, 60 g/L glucose, replicate 1 description:wild type, 5% EtOH, 60 g/L glucose
14 GSM116822 wild type, 5% EtOH, 60 g/L glucose, replicate 2 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 5% EtOH, 60 g/L glucose, replicate 2 description:wild type, 5% EtOH, 60 g/L glucose
15 GSM116823 wild type, 5% EtOH, 60 g/L glucose, replicate 3 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-SPT15) title:wild type, 5% EtOH, 60 g/L glucose, replicate 3 description:wild type, 5% EtOH, 60 g/L glucose
16 GSM116824 mutant spt15, 5% EtOH, 60 g/L glucose, replicate 1 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 5% EtOH, 60 g/L glucose, replicate 1 description:mutant spt15, 5% EtOH, 60 g/L glucose
17 GSM116825 mutant spt15, 5% EtOH, 60 g/L glucose, replicate 2 (OUTLIER) 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 5% EtOH, 60 g/L glucose, replicate 2 (OUTLIER) description:mutant spt15, 5% EtOH, 60 g/L glucose
18 GSM116826 mutant spt15, 5% EtOH, 60 g/L glucose, replicate 3 10,928 MIT 2006-06-28 [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:BY4741 (p416-Tefmut2-spt15-300) title:mutant spt15, 5% EtOH, 60 g/L glucose, replicate 3 description:mutant spt15, 5% EtOH, 60 g/L glucose
19 GSM116398 Seedling_Control_rep2 57,381 National Institute for Plant Genome Research (NIPGR) 2006-06-27 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 young aerial structure 7-day-old light-grown rice seedlings
20 GSM116399 Seedling_IAA treated_rep1 57,381 National Institute for Plant Genome Research (NIPGR) 2006-06-27 [GeneChip] [Rice] Affymetrix Rice Genome Array (GPL2025) RNA Oryza sativa
Oryza sativa		 young aerial structure 7-day-old light-grown rice seedlings
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