Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(2,493)		   Primates
(0)		   Rodents
(291)		   Mammals
(0)		   Vertebrates
(0)		   Invertebrates
(155)		   Plants
(777)		   Bacteria
(251)		   Viruses
(0)		   Phages
(0)		   Unclassified
(0)		   All
(4,043)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(71)		   Tiling Array
(0)		   cDNA Array
(491)		   Oligo Array
(193)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(22)		   Other
(0)		   All
(777)		  
  brain
(0)		   blood
(0)		   connective
(0)		   reproductive
(42)		   muscular
(0)		   digestive
(0)		   liver
(0)		   lung
(0)		   urinary
(0)		   endo/exo-crine
(0)		   embryo
(0)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(186)		   unclassified
(338)		   all
(777)		  
1   |   2   |   3   |   4   |   5      »      [39]
Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1040775 tolerant 0h (leaf) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 leaf leaf
2 GSM1040776 tolerant 24h (leaf) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 leaf leaf
3 GSM1040777 sensitive 0h (leaf) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 leaf leaf
4 GSM1040778 sensitive 24h (leaf) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 leaf leaf
5 GSM1040779 tolerant 0h (root) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 root root
6 GSM1040780 tolerant 24h (root) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 root root
7 GSM1040781 sensitive 0h (root) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 root root
8 GSM1040782 sensitive 24h (root) 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar (mixed)) (GPL16316) SRA Saccharum hybrid cultivar (mixed)
Saccharum hybrid cultivar (mixed)		 root root
9 GSM1040783 control 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 leaf leaf
10 GSM1040784 0h 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 leaf leaf
11 GSM1040785 1h 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 leaf leaf
12 GSM1040786 24h 0 Universidade Federal do Rio de Janeiro 2012-11-23 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 leaf leaf
13 GSM1046305 SP70-1143-control 0 Universidade Federal do Rio de Janeiro 2012-11-29 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 pooled whole plant
14 GSM1046306 SP70-1143-inoculated 0 Universidade Federal do Rio de Janeiro 2012-11-29 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP70-1143) (GPL16317) SRA Saccharum hybrid cultivar SP70-1143
Saccharum hybrid cultivar SP70-1143		 pooled whole plant
15 GSM769294 CLRDV_Infected _plant_rep1 0 Universidade Federal do Rio de Janeiro 2011-07-30 [HT Sequencing] Illumina Genome Analyzer IIx (Gossypium hirsutum) (GPL14001) SRA Gossypium hirsutum
Gossypium hirsutum		 leaf Leaves from cotton infected plant with Cotton leafroll dwarf virus (CLRDV)
16 GSM769295 CLRDV_Infected_plant_rep2 0 Universidade Federal do Rio de Janeiro 2011-07-30 [HT Sequencing] Illumina Genome Analyzer IIx (Gossypium hirsutum) (GPL14001) SRA Gossypium hirsutum
Gossypium hirsutum		 leaf Leaves from cotton infected plant with Cotton leafroll dwarf virus (CLRDV)
17 GSM769296 Not-infected_plant 0 Universidade Federal do Rio de Janeiro 2011-07-30 [HT Sequencing] Illumina Genome Analyzer IIx (Gossypium hirsutum) (GPL14001) SRA Gossypium hirsutum
Gossypium hirsutum		 leaf Leaves from cotton not-infected plant
18 GSM862604 Leaves 0 Universidade Estadual de Campinas - UNICAMP 2012-01-17 [HT Sequencing] Illumina Genome Analyzer IIx (Saccharum officinarum) (GPL15137) SRA Saccharum officinarum
Saccharum officinarum		 leaf Leaves
19 GSM936811 GEK-49 0 Universidade Federal do Rio Grande do Sul 2012-05-24 [HT Sequencing] Illumina HiSeq 2000 (Eugenia uniflora) (GPL15604) SRA Eugenia uniflora
Eugenia uniflora		 leaf leaf
20 GSM936812 GEK-54 0 Universidade Federal do Rio Grande do Sul 2012-05-24 [HT Sequencing] Illumina HiSeq 2000 (Eugenia uniflora) (GPL15604) SRA Eugenia uniflora
Eugenia uniflora		 leaf leaf
1   |   2   |   3   |   4   |   5      »      [39]
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