Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,371)		   Tiling Array
(5,043)		   cDNA Array
(23,783)		   Oligo Array
(30,226)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,443)		   Other
(117)		   All
(91,454)		  
  brain
(306)		   blood
(1,138)		   connective
(192)		   reproductive
(456)		   muscular
(16)		   digestive
(44)		   liver
(0)		   lung
(76)		   urinary
(43)		   endo/exo-crine
(101)		   embryo
(123)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,758)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,122)		   pooled
(6,585)		   unclassified
(48,819)		   all
(91,454)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM148148 velvetleaf/corn competition C1RW2B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Weed with corn Velvetleaf in monoculture title:velvetleaf/corn competition C1RW2B description:NA
2 GSM148150 velvetleaf/corn competition C1RW4B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Velvetleaf/corn competition Velvetleaf in monoculture title:velvetleaf/corn competition C1RW4B description:NA
3 GSM148199 velvetleaf/corn competition C2RW4B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Weed with corn Velvetleaf in monoculture title:velvetleaf/corn competition C2RW4B description:NA
4 GSM148200 velvetleaf/corn competition C4RW1B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Weed with corn Velvetleaf in monoculture title:velvetleaf/corn competition C4RW1B description:NA
5 GSM148201 velvetleaf/corn competition W1RC1B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Velvetleaf in monoculture Weed with corn title:velvetleaf/corn competition W1RC1B description:NA
6 GSM148202 velvetleaf/corn competition W1RC2B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Velvetleaf in monoculture Weed with corn title:velvetleaf/corn competition W1RC2B description:NA
7 GSM148203 velvetleaf/corn competition W2RC2B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Velvetleaf in monoculture Weed with corn title:velvetleaf/corn competition W2RC2B description:NA
8 GSM148204 velvetleaf/corn competition W4RC4B 24,288 US Dept. Agriculture 2006-12-04 [cDNA Array] CSIRO cotton whole plant cDNA array (GPL4043) RNA Abutilon theophrasti
Abutilon theophrasti		 unclassified source_name:Velvetleaf in monoculture Weed with corn title:velvetleaf/corn competition W4RC4B description:NA
9 GSM506069 squa36B_5j with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii
Aegilops tauschii		 unclassified source_name:squa36B_5j title:squa36B_5j with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat Squa36B: is the wheat species Aegilops tauschii spp. strangulata, accession number 36, biological replicate number 2 (or B)
10 GSM506071 squa54c_2j with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii
Aegilops tauschii		 unclassified source_name:squa54c_2j title:squa54c_2j with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat squa54_2: is the wheat species Aegilops tauschii spp. tauschii, accession number 54, biological replicate number 2.
11 GSM506072 squa36A_3b with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii
Aegilops tauschii		 unclassified source_name:squa36A_3b title:squa36A_3b with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat Squa36A: is the wheat species Aegilops tauschii spp. strangulata, accession number 36 biological replicate number 1 (or A).
12 GSM740074 Leaf of TQ27, biological rep1 61,290 chinese academy of science 2011-06-10 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii
Aegilops tauschii		 leaf Leaf of TQ27
13 GSM740075 Leaf of TQ27, biological rep2 61,290 chinese academy of science 2011-06-10 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii
Aegilops tauschii		 leaf Leaf of TQ27
14 GSM723048 Parent DD 0 The Weizmann Institute of Science 2011-05-12 [HT Sequencing] Illumina Genome Analyzer (Aegilops tauschii) (GPL13525) SRA Aegilops tauschii
Aegilops tauschii		 pooled whole plant
15 GSM506070 squa54a_6b with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:squa54a_6b title:squa54a_6b with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat squa54_1: is the wheat species Aegilops tauschii spp. tauschii, accession number 54, biological replicate number 1.
16 GSM506074 mix36joy with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:mix36joy title:mix36joy with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat mix36joy: is the hybridization values of a sample composed of equal amounts of RNA from Triticum turgidum cv Joyau and Aegilops tauschii spp. strangulata acc.36, respectively, replicate 1.
17 GSM506075 mix54joy with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:mix54joy title:mix54joy with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat mix54joy: is the hybridization values of a sample composed of equal amounts of RNA from Triticum turgidum cv Joyau and Aegilops tauschii spp. tauschii acc.54, respectively, replicate 1.
18 GSM506076 S1JOY54.7 with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:S1JOY54.7 title:S1JOY54.7 with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat S1JOY54.7: is the selfed generation number 1 of the hybrid derived from Triticum turgidum cv Joyau X Aegilops tauschii spp. tauschii acc.54, biological replicate number 7.
19 GSM506077 S1JOY54.5 with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:S1JOY54.5 title:S1JOY54.5 with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat S1JOY54.5: is the selfed generation number 1 of the hybrid derived from Triticum turgidum cv Joyau X Aegilops tauschii spp. tauschii acc.54, biological replicate number 5.
20 GSM506078 S0JOY36.3 with array type wheat from Affymetrix 61,290 INRA 2010-02-03 [GeneChip] [wheat] Affymetrix Wheat Genome Array (GPL3802) RNA Aegilops tauschii x Triticum turgidum
Aegilops tauschii x Triticum turgidum		 unclassified source_name:S0JOY36.3 title:S0JOY36.3 with array type wheat from Affymetrix description:Changes upon polyploidization in hexaploid wheat S0JOY36.3: is the selfed generation number 0 of the hybrid derived from Triticum turgidum cv Joyau X Aegilops tauschii spp. strangulata acc.36, biological replicate number 3.
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