Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(13,212)
  Primates
(64)
  Rodents
(3,987)
  Mammals
(366)
  Vertebrates
(470)
  Invertebrates
(657)
  Plants
(2,050)
  Bacteria
(1,192)
  Viruses
(80)
  Phages
(0)
  Unclassified
(55)
  All
(22,133)
 
  SAGE NlaIII
(10)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(698)
  Tiling Array
(219)
  cDNA Array
(318)
  Oligo Array
(784)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(17)
  Other
(3)
  All
(2,050)
 
  brain
(0)
  blood
(2)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(6)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(322)
  young aerial structure
(64)
  root
(12)
  meristem/growing tissue
(17)
  flower/sexual organ
(123)
  seed/fruit/grain
(60)
  pooled
(252)
  unclassified
(1,150)
  all
(2,050)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM313535 [gar-] sample #1 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential growth phase title:[gar-] sample #1 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
2 GSM313536 [GAR+] sample #1 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential growth phase title:[GAR+] sample #1 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
3 GSM313537 [gar-] sample #2 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential phase title:[gar-] sample #2 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
4 GSM313538 [GAR+] sample #2 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential phase title:[GAR+] sample #2 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
5 GSM313539 [gar-] sample #3 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential phase title:[gar-] sample #3 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
6 GSM313540 [GAR+] sample #3 9,335 Whitehead/MIT 2008-08-18 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:planktonic yeast, late exponential phase title:[GAR+] sample #3 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
7 GSM311596 Wild-type 131,158 Whitehead Institute/MIT 2008-08-12 [HT Sequencing] 454 GS (Schizosaccharomyces pombe) (GPL9157) SRA Schizosaccharomyces pombe
Schizosaccharomyces pombe
unclassified source_name:wild-type title:Wild-type description:Argonaute-associated small RNAs were sequenced from wild-type fission yeast.
8 GSM311595 cid14-deletion 124,062 Whitehead Institute/MIT 2008-08-12 [HT Sequencing] 454 GS (Schizosaccharomyces pombe) (GPL9157) SRA Schizosaccharomyces pombe
Schizosaccharomyces pombe
unclassified source_name:cid14-deletion title:cid14-deletion description:Argonaute-associated small RNAs were sequenced from cid14-deletion fission yeast.
9 GSM317519 Apex_5DAS_1 22,810 Weizmann Institute 2008-09-03 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_5DAS_1
10 GSM317526 Apex_5DAS_2 22,810 Weizmann Institute 2008-09-03 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_5DAS_2
11 GSM317619 Apex_14DAS_1 22,810 Weizmann Institute 2008-09-03 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_14DAS_1
12 GSM317624 Apex_14DAS_2 22,810 Weizmann Institute 2008-09-03 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_14DAS_2
13 GSM318330 EL_14DAS_1 22,810 Weizmann Institute 2008-09-05 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf Arabidopsis thaliana expanding leaves 1+2
14 GSM318331 EL_14DAS_2 22,810 Weizmann Institute 2008-09-05 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf Arabidopsis thaliana expanding leaves 1+2
15 GSM318332 ML_35DAS_1 22,810 Weizmann Institute 2008-09-05 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf Arabidopsis thaliana mature leaves
16 GSM318345 ML_35DAS_2 22,810 Weizmann Institute 2008-09-05 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf Arabidopsis thaliana mature leaves
17 GSM318618 Apex_Col_14DAS_1 22,810 Weizmann Institute 2008-09-07 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_Col_14DAS_1
18 GSM318619 Apex_Col_14DAS_2 22,810 Weizmann Institute 2008-09-07 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_Col_14DAS_2
19 GSM318620 Apex_mir-3TCP_14DAS_1 22,810 Weizmann Institute 2008-09-07 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_mir-3TCP_14DAS_1
20 GSM318621 Apex_mir-3TCP_14DAS_2 22,810 Weizmann Institute 2008-09-07 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
meristem/growing tissue Apex_mir-3TCP_14DAS_2
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