Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Plants
(93,301)

Bacteria
(39,613)

Viruses
(1,263)

SAGE RsaI
(0)

SAGE Sau3A
(0)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

All
(93,301)

liver
(0)

adult aerial structure
(12,240)

young aerial structure
(8,419)

root
(4,862)

meristem/growing tissue
(2,307)

flower/sexual organ
(3,159)

seed/fruit/grain
(3,159)

pooled
(6,762)

unclassified
(49,859)

all
(93,301)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
1	GSM313539	[gar-] sample #3	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential phase title:[gar-] sample #3 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
2	GSM313537	[gar-] sample #2	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential phase title:[gar-] sample #2 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
3	GSM313535	[gar-] sample #1	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential growth phase title:[gar-] sample #1 description:[gar-] W303 yeast grown in 2% glucose medium to late exponential phase.
4	GSM313540	[GAR+] sample #3	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential phase title:[GAR+] sample #3 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
5	GSM313538	[GAR+] sample #2	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential phase title:[GAR+] sample #2 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
6	GSM313536	[GAR+] sample #1	9,335	Whitehead/MIT	2008-08-18	[GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90)	RNA	Saccharomyces cerevisiae	unclassified	source_name:planktonic yeast, late exponential growth phase title:[GAR+] sample #1 description:[GAR+] W303 yeast grown in 2% glucose medium to late exponential phase.
7	GSM662369	[Exp4_Cy5_root apex without MCP_rep4]-[Exp4_Cy3_root base with MCP_rep4]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
8	GSM662367	[Exp4_Cy5_root apex without MCP_rep2]-[Exp4_Cy3_root base with MCP_rep2]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
9	GSM662368	[Exp4_Cy5_root apex with MCP_rep3]-[Exp4_Cy3_root base without MCP_rep3]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
10	GSM662366	[Exp4_Cy5_root apex with MCP_rep1]-[Exp4_Cy3_root base without MCP_rep1]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
11	GSM662363	[Exp3_Cy5_root base without ethylene_rep2]-[Exp3_Cy3_root base with ethylene_rep2]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
12	GSM662362	[Exp3_Cy5_root base with ethylene_rep1]-[Exp3_Cy3_root base without ethylene_rep1]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
13	GSM662365	[Exp3_Cy3_root base without ethylene_rep4]-[Exp3_Cy5_root base with ethylene_rep4]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
14	GSM662364	[Exp3_Cy3_root base with ethylene_rep3]-[Exp3_Cy5_root base without ethylene_rep3]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
15	GSM662360	[Exp2_Cy5_root base in Hypoxia_rep4]-[Exp2_Cy3_root base in Air_rep4]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
16	GSM662358	[Exp2_Cy5_root base in Hypoxia_rep2]-[Exp2_Cy3_root base in Air_rep2]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
17	GSM662357	[Exp2_Cy5_root base in Hypoxia_rep1]-[Exp2_Cy3_root base in Air_rep1]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
18	GSM662361	[Exp2_Cy5_root base in Air_rep5]-[Exp2_Cy3_root base in Hypoxia_rep5]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
19	GSM662359	[Exp2_Cy5_root base in Air_rep3]-[Exp2_Cy3_root base in Hypoxia_rep3]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex
20	GSM662356	[Exp1_Cy5_root base in Hypoxia_rep6]-[Exp1_Cy3_root apex in Hypoxia_rep6]	14,118	University of Tokyo	2011-01-27	[cDNA Array] Maize SAM1.2 Array (GPL4521)	RNA	Zea mays	root	Maize primary root cortex

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