Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(4,712)
  Primates
(41)
  Rodents
(1,963)
  Mammals
(85)
  Vertebrates
(71)
  Invertebrates
(162)
  Plants
(837)
  Bacteria
(313)
  Viruses
(0)
  Phages
(18)
  Unclassified
(320)
  All
(8,522)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(137)
  Tiling Array
(8)
  cDNA Array
(613)
  Oligo Array
(45)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(2)
  All
(837)
 
  brain
(16)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(63)
  young aerial structure
(22)
  root
(40)
  meristem/growing tissue
(21)
  flower/sexual organ
(144)
  seed/fruit/grain
(0)
  pooled
(39)
  unclassified
(492)
  all
(837)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM50386 Udt1-1 anther and Wild type_anther 60,727 Genomics and Genetics Institute, GreenGene Biotech 2005-05-04 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa
anther UDT1-1 anther Wild type anther
2 GSM50387 Udt1-1 anther and Wild type_anther_dye-swap_1 60,727 Genomics and Genetics Institute, GreenGene Biotech 2005-05-04 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa
anther Wild type_anther Udt1-1 anther
3 GSM50388 Udt1-1 anther and Wild type_anther_dye-swap_2 60,727 Genomics and Genetics Institute, GreenGene Biotech 2005-05-04 [Oligo Array] Rice Genome Oligo Set V1.0 (GPL1829) RNA Oryza sativa
Oryza sativa
anther Wild type_anther Udt1-1 anther
4 GSM51954 Heading panicle BP1 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Heading panicle BP1
5 GSM51955 Heading panicle BP2 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Heading panicle BP2
6 GSM51956 Heading panicle BP3 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Heading panicle BP3
7 GSM51957 Filling panicle BP1 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Filling panicle BP1
8 GSM51958 Filling panicle BP2 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Filling panicle BP2
9 GSM51959 Filling panicle BP3 30,000 Yale University 2005-05-19 [MIXTURE] LIMA_SlideB (GPL1774) RNA Oryza sativa Indica Group
Oryza sativa Indica Group
other flower/sexual organ Filling panicle BP3
10 GSM47011 Col-0 1 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
11 GSM47012 Col-0 2 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
12 GSM47013 Col-0 3 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
13 GSM47014 Ler 4 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
14 GSM47015 Ler 5 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
15 GSM47016 Ler 6 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
16 GSM47017 Ler 7 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
17 GSM47018 Ler 8 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
18 GSM47019 Ler 9 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
19 GSM47020 Col-0 10 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
20 GSM47021 Col-0 11 22,810 Oregon State University 2005-04-01 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana
other flower/sexual organ inflorescence stages 1 to 12
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