Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(92)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(366)
  GeneChip
(31,260)
  Tiling Array
(5,692)
  cDNA Array
(24,724)
  Oligo Array
(35,607)
  Bead Array
(2,290)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(6)
  HT-Seq
(7,427)
  Other
(120)
  All
(107,706)
 
  brain
(324)
  blood
(1,302)
  connective
(232)
  reproductive
(482)
  muscular
(29)
  digestive
(52)
  liver
(0)
  lung
(77)
  urinary
(53)
  endo/exo-crine
(129)
  embryo
(177)
  adult aerial structure
(15,762)
  young aerial structure
(9,385)
  root
(5,765)
  meristem/growing tissue
(2,624)
  flower/sexual organ
(3,659)
  seed/fruit/grain
(3,775)
  pooled
(7,302)
  unclassified
(56,577)
  all
(107,706)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM215597 13281300 - C16-24h-mutant vs C11-24h-WT 25,296 INRA 2007-08-06 [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.2 (GPL4346) RNA Arabidopsis thaliana
Arabidopsis thaliana
lung C11-24h-WT C16-24h-mutant
2 GSM215598 13281301 - C11-24h-WT vs C16-24h-mutant 25,261 INRA 2007-08-06 [cDNA Array] URGV Arabidopsis thaliana 25K CATMA_v2.2 (GPL4346) RNA Arabidopsis thaliana
Arabidopsis thaliana
lung C16-24h-mutant C11-24h-WT
3 GSM345036 Gill_tissue_K-3_rep1 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours before kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
4 GSM345037 Gill_tissue_K-3_rep2 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours before kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
5 GSM345038 Gill_tissue_K-3_rep3 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours before kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
6 GSM345039 Gill_tissue_K-3_rep4 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours before kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
7 GSM345040 Gill_tissue_K_rep1 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, at kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
8 GSM345041 Gill_tissue_K_rep2 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, at kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
9 GSM345042 Gill_tissue_K_rep3 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, at kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
10 GSM345043 Gill_tissue_K_rep4 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, at kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
11 GSM345044 Gill_tissue_K+3_rep1 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
12 GSM345045 Gill_tissue_K+3_rep2 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
13 GSM345046 Gill_tissue_K+3_rep3 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
14 GSM345047 Gill_tissue_K+3_rep4 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 3 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
15 GSM345048 Gill_tissue_K+6_rep1 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 6 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
16 GSM345049 Gill_tissue_K+6_rep2 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 6 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
17 GSM345050 Gill_tissue_K+6_rep3 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 6 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
18 GSM345051 Gill_tissue_K+6_rep4 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 6 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
19 GSM345052 Gill_tissue_K+9_rep1 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 9 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
20 GSM345053 Gill_tissue_K+9_rep2 13,440 Indiana University 2008-11-25 [Oligo Array] IU/UNC Coprinopsis cinerea (GPL7697) RNA Coprinopsis cinerea
Coprinopsis cinerea
lung C. cinerea excised gill tissue, 9 hours after kayogamy Mixture of RNA from timepoint samples K+3,K+6,K+9,K+12
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