Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(88)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(298)		   GeneChip
(27,371)		   Tiling Array
(5,043)		   cDNA Array
(23,783)		   Oligo Array
(30,226)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(4,443)		   Other
(117)		   All
(91,454)		  
  brain
(306)		   blood
(1,138)		   connective
(192)		   reproductive
(456)		   muscular
(16)		   digestive
(44)		   liver
(0)		   lung
(76)		   urinary
(43)		   endo/exo-crine
(101)		   embryo
(123)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,758)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,122)		   pooled
(6,585)		   unclassified
(48,819)		   all
(91,454)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM99408 Rice_Root_No N_rep2 22,575 Nanjing Agricultural University 2006-03-08 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root No N treated root sample labeled by green NH4NO3 treated root sample labeled by red
2 GSM99406 Rice_Root_No N_rep1 22,575 Nanjing Agricultural University 2006-03-08 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root NH4NO3 treated root sample labeled by green No N treated root sample labeled by red
3 GSM99403 Rice_Root_NO3_rep2 22,575 Nanjing Agricultural University 2006-03-08 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root NO3-only treated root sample labeled by green NH4NO3 treated root sample labeled by red
4 GSM99402 Rice_Root_NH4_rep2 22,575 Nanjing Agricultural University 2006-03-08 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root NH4 only treated root sample labeled by green NH4NO3 treated root sample labeled by red
5 GSM99307 Rice_Root_NH4_rep1 22,575 Nanjing Agricultural University 2006-03-07 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root NH4NO3 treated root sample labeled by green NH4-only treated root sample labeled by red
6 GSM99300 Rice_Root_NO3-rep1 22,575 Nanjing Agricultural University 2006-03-07 [Oligo Array] Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version) (GPL892) RNA Oryza sativa
Oryza sativa		 root NH4NO3 treated root sample labeled by green NO3-only treated root sample labeled by red
7 GSM986568 root tissue from Prunus mume 0 BGI 2012-08-16 [HT Sequencing] Illumina HiSeq 2000 (Prunus mume) (GPL15946) SRA Prunus mume
Prunus mume		 root root
8 GSM984742 roots of WT 100uM Fe, biological rep3 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 100uM Fe
9 GSM984741 roots of WT 100uM Fe, biological rep2 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 100uM Fe
10 GSM984740 roots of WT 100uM Fe, biological rep1 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 100uM Fe
11 GSM984739 roots of WT 0uM Fe, biological rep3 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 0uM Fe
12 GSM984738 roots of WT 0uM Fe, biological rep2 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 0uM Fe
13 GSM984737 roots of WT 0uM Fe, biological rep1 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of WT 0uM Fe
14 GSM984736 roots of bhlh100/101 100uM Fe, biological rep3 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 100uM Fe
15 GSM984735 roots of bhlh100/101 100uM Fe, biological rep2 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 100uM Fe
16 GSM984734 roots of bhlh100/101 100uM Fe, biological rep1 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 100uM Fe
17 GSM984733 roots of bhlh100/101 0uM Fe, biological rep3 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 0uM Fe
18 GSM984732 roots of bhlh100/101 0uM Fe, biological rep2 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 0uM Fe
19 GSM984731 roots of bhlh100/101 0uM Fe, biological rep1 22,810 Dartmouth College 2012-08-13 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root roots of bhlh100/101 0uM Fe
20 GSM984541 camta1 root drought,biological replicate 3 22,810 CSIR-NBRI 2012-08-12 [GeneChip] [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array (GPL198) RNA Arabidopsis thaliana
Arabidopsis thaliana		 root Arabidopsis Thaliana mutant root in drought condition
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