Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)
  Primates
(4,928)
  Rodents
(181,106)
  Mammals
(16,260)
  Vertebrates
(18,263)
  Invertebrates
(37,338)
  Plants
(91,454)
  Bacteria
(39,082)
  Viruses
(1,266)
  Phages
(101)
  Unclassified
(5,242)
  All
(898,944)
 
  SAGE NlaIII
(88)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(298)
  GeneChip
(27,371)
  Tiling Array
(5,043)
  cDNA Array
(23,783)
  Oligo Array
(30,226)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(4,443)
  Other
(117)
  All
(91,454)
 
  brain
(0)
  blood
(0)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(76)
  urinary
(43)
  endo/exo-crine
(101)
  embryo
(123)
  adult aerial structure
(12,032)
  young aerial structure
(8,350)
  root
(4,758)
  meristem/growing tissue
(2,248)
  flower/sexual organ
(3,045)
  seed/fruit/grain
(3,122)
  pooled
(6,585)
  unclassified
(48,819)
  all
(91,454)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM387686 fruit_elongated_rep 1 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
2 GSM387687 fruit_elongated_rep 2 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
3 GSM387688 fruit_elongated_rep 3 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
4 GSM387689 fruit_round_repl 1 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
5 GSM387690 fruit_round_repl 2 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
6 GSM387691 fruit_round_repl 3 15,270 The Ohio State University 2009-03-30 [Oligo Array] 2004_02_03_Hogenhout_24mer (GPL8362) RNA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain developing fruits 5 days post pollination
7 GSM709853 fruit_15dap_Piel-de-sapo 14,620 CEBAS-CSIC 2011-04-15 [HT Sequencing] 454 GS (Cucumis melo) (GPL13414) SRA Cucumis melo
Cucumis melo
other seed/fruit/grain fruit
8 GSM709854 fruit_45dap_Piel-de-sapo 8,167 CEBAS-CSIC 2011-04-15 [HT Sequencing] 454 GS (Cucumis melo) (GPL13414) SRA Cucumis melo
Cucumis melo
other seed/fruit/grain fruit
9 GSM960652 0dpp 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
10 GSM960653 4dpp 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
11 GSM960654 8dpp reg1 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
12 GSM960655 8dpp reg2 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
13 GSM960656 12dpp 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
14 GSM960657 16dpp 0 Michigan State University 2012-07-12 [HT Sequencing] 454 GS (Cucumis sativus var. sativus) (GPL15801) SRA Cucumis sativus var. sativus
Cucumis sativus var. sativus
other seed/fruit/grain Fruit during early development
15 GSM722566 TF68_RNA 0 Kongju National University 2011-05-11 [HT Sequencing] 454 GS FLX (Capsicum annuum) (GPL13518) SRA Capsicum annuum
Capsicum annuum
other seed/fruit/grain Trancriptome profiling of red pepper TF68 accession, muture fruit
16 GSM828874 Fruit Mature Green 0 National Research Council 2011-11-07 [HT Sequencing] 454 GS FLX Titanium (Solanum lycopersicum) (GPL14847) SRA Solanum lycopersicum
Solanum lycopersicum
other seed/fruit/grain Fruit Mature Green
17 GSM828875 Fruit Breaker 0 National Research Council 2011-11-07 [HT Sequencing] 454 GS FLX Titanium (Solanum lycopersicum) (GPL14847) SRA Solanum lycopersicum
Solanum lycopersicum
other seed/fruit/grain Fruit Breaker
18 GSM828876 Fruit Ripe 0 National Research Council 2011-11-07 [HT Sequencing] 454 GS FLX Titanium (Solanum lycopersicum) (GPL14847) SRA Solanum lycopersicum
Solanum lycopersicum
other seed/fruit/grain Fruit Ripe
19 GSM828878 Fruit Ripe pimpinellifolium 0 National Research Council 2011-11-07 [HT Sequencing] 454 GS FLX Titanium (Solanum pimpinellifolium) (GPL14848) SRA Solanum pimpinellifolium
Solanum pimpinellifolium
other seed/fruit/grain Fruit Ripe
20 GSM880655 Endogenous small RNAs from apple fruit 0 Virginia Tech 2012-02-24 [HT Sequencing] AB SOLiD 4 System (Malus x domestica) (GPL15277) SRA Malus x domestica
Malus x domestica
other seed/fruit/grain apple fruit
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