Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,432)
  Primates
(665)
  Rodents
(7,826)
  Mammals
(399)
  Vertebrates
(731)
  Invertebrates
(1,567)
  Plants
(3,435)
  Bacteria
(998)
  Viruses
(14)
  Phages
(0)
  Unclassified
(76)
  All
(33,163)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(4)
  GeneChip
(806)
  Tiling Array
(260)
  cDNA Array
(1,292)
  Oligo Array
(981)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(90)
  Other
(0)
  All
(3,435)
 
  brain
(0)
  blood
(0)
  connective
(27)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(59)
  young aerial structure
(531)
  root
(12)
  meristem/growing tissue
(0)
  flower/sexual organ
(32)
  seed/fruit/grain
(188)
  pooled
(38)
  unclassified
(405)
  all
(1,292)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM389325 PVX_vs_Mock_rep1 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus X (PVX) infected plant sap onto leaves dusted with carborundum powder
2 GSM389326 PVX_vs_Mock_rep2 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus X (PVX) infected plant sap onto leaves dusted with carborundum powder
3 GSM389327 PVX_vs_Mock_rep3 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus X (PVX) infected plant sap onto leaves dusted with carborundum powder
4 GSM389328 PVY_vs_Mock_rep1 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus Y (PVY) infected plant sap onto leaves dusted with carborundum powder
5 GSM389329 PVY_vs_Mock_rep2 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus Y (PVY) infected plant sap onto leaves dusted with carborundum powder
6 GSM389330 PVY_vs_Mock_rep3 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing Potato virus Y (PVY) infected plant sap onto leaves dusted with carborundum powder
7 GSM389331 PVX+PVY_vs_Mock_rep1 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing PVX+PVY infected plant sap onto leaves dusted with carborundum powder
8 GSM389332 PVX+PVY_vs_Mock_rep2 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing PVX+PVY infected plant sap onto leaves dusted with carborundum powder
9 GSM389333 PVX+PVY_vs_Mock_rep3 32,448 Centro de Investigaciones Biológicas, CSIC 2009-04-03 [cDNA Array] Potato 10k cDNA array version 4 (GPL3838) RNA Nicotiana benthamiana
Nicotiana benthamiana
leaf 4 week old plants were mock inoculated by rubbing sap from healthy plants 4 week old plants were inoculated by rubbing PVX+PVY infected plant sap onto leaves dusted with carborundum powder
10 GSM419228 cDNA array spring+common reference set1 30,000 College of life sciences, Peking University 2009-06-20 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in spring (May) common reference
11 GSM419333 cDNA array spring+common reference set1 (dye swap) 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary common reference +7 DPA wide-type cotton ovule obtained in spring (May)
12 GSM419334 cDNA array spring+common reference set2 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in spring (May) common reference
13 GSM419335 cDNA array spring+common reference set2 (dye swap) 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary common reference +7 DPA wide-type cotton ovule obtained in spring (May)
14 GSM419336 cDNA array spring+common reference set3 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in spring (May) common reference
15 GSM419337 cDNA array spring+common reference set3 (dye swap) 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary common reference +7 DPA wide-type cotton ovule obtained in spring (May)
16 GSM419338 cDNA array spring+common reference set4 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in spring (May) common reference
17 GSM419340 cDNA array spring+common reference set4 (dye swap) 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary common reference +7 DPA wide-type cotton ovule obtained in spring (May)
18 GSM419341 cDNA array summer+common reference set1 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in summer (August) common reference
19 GSM419343 cDNA array summer+common reference set1 (dye swap) 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary common reference +7 DPA wide-type cotton ovule obtained in summer (August)
20 GSM419345 cDNA array summer+common reference set2 30,000 College of life sciences, Peking University 2009-06-21 [cDNA Array] Cotton cDNA array (28,178 features) (GPL8569) RNA Gossypium hirsutum
Gossypium hirsutum
ovary +7 DPA wide-type cotton ovule obtained in summer (August) common reference
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