Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(7,940)
  Primates
(0)
  Rodents
(3,048)
  Mammals
(470)
  Vertebrates
(439)
  Invertebrates
(572)
  Plants
(1,368)
  Bacteria
(549)
  Viruses
(0)
  Phages
(0)
  Unclassified
(30)
  All
(14,428)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(431)
  Tiling Array
(0)
  cDNA Array
(391)
  Oligo Array
(460)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(1,368)
 
  brain
(0)
  blood
(4)
  connective
(0)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(46)
  meristem/growing tissue
(24)
  flower/sexual organ
(129)
  seed/fruit/grain
(52)
  pooled
(0)
  unclassified
(72)
  all
(391)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM944528 pineapple_green vs yellow fruit_509_rep1 2,227 University of Queensland 2012-06-06 [cDNA Array] UQ_PGEL_Pineapple_10K_v1.0 (GPL15669) RNA Ananas comosus
Ananas comosus
other seed/fruit/grain pine9 mature yellow fruit_W595 pine3 mature green fruit_W685
2 GSM944529 pineapple_green vs yellow fruit_516_rep2 2,227 University of Queensland 2012-06-06 [cDNA Array] UQ_PGEL_Pineapple_10K_v1.0 (GPL15669) RNA Ananas comosus
Ananas comosus
other seed/fruit/grain pine9 mature yellow fruit_W685 pine3 mature green fruit_W595
3 GSM944530 pineapple_green vs yellow fruit_985_rep3 2,227 University of Queensland 2012-06-06 [cDNA Array] UQ_PGEL_Pineapple_10K_v1.0 (GPL15669) RNA Ananas comosus
Ananas comosus
other seed/fruit/grain pine9 mature yellow fruit_W595 pine3 mature green fruit_W685
4 GSM795487 HD vs LD (Bulk) 1 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD1 LD1 title:HD vs LD (Bulk) 1
5 GSM795488 HD vs LD (Bulk) 1, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD1 LD1 title:HD vs LD (Bulk) 1, dye swap
6 GSM795489 HD vs LD (Bulk) 2 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD2 LD2 title:HD vs LD (Bulk) 2
7 GSM795490 HD vs LD (Bulk) 2, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD2 LD2 title:HD vs LD (Bulk) 2, dye swap
8 GSM795491 HD vs LD (Individual) 3 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD3 LD3 title:HD vs LD (Individual) 3
9 GSM795492 HD vs LD (Individual) 3, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD3 LD3 title:HD vs LD (Individual) 3, dye swap
10 GSM795493 HD vs LD (Individual) 4 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD4 LD4 title:HD vs LD (Individual) 4
11 GSM795494 HD vs LD (Individual) 4, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD4 LD4 title:HD vs LD (Individual) 4, dye swap
12 GSM795495 HD vs LD (Individual) 5 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD5 LD5 title:HD vs LD (Individual) 5
13 GSM795496 HD vs LD (Individual) 5, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD5 LD5 title:HD vs LD (Individual) 5, dye swap
14 GSM795497 HD vs LD (Individual) 6 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD6 LD6 title:HD vs LD (Individual) 6
15 GSM795498 HD vs LD (Individual) 6, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD6 LD6 title:HD vs LD (Individual) 6, dye swap
16 GSM795499 HD vs LD (Individual) 7 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD7 LD7 title:HD vs LD (Individual) 7
17 GSM795500 HD vs LD (Individual) 7, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD7 LD7 title:HD vs LD (Individual) 7, dye swap
18 GSM795501 HD vs LD (Individual) 8 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD8 LD8 title:HD vs LD (Individual) 8
19 GSM795502 HD vs LD (Individual) 8, dye swap 18,432 CSIRO 2011-09-13 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HD8 LD8 title:HD vs LD (Individual) 8, dye swap
20 GSM567867 HS vs LS in Flynn-EW1 18,432 CSIRO 2010-07-20 [cDNA Array] Radiata pine 18K cDNA microarrays (GPL8302) RNA Pinus radiata
Pinus radiata
unclassified source_name:HS1 LS1 title:HS vs LS in Flynn-EW1 description:Either HS or LS can be the experimental sample while the other as control sample.
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