Gene Expression Omnibus (GEO) Overview Version：2013-05-25Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,438)		   Primates
(205)		   Rodents
(12,530)		   Mammals
(774)		   Vertebrates
(1,152)		   Invertebrates
(3,917)		   Plants
(6,619)		   Bacteria
(2,962)		   Viruses
(50)		   Phages
(4)		   Unclassified
(282)		   All
(46,983)		  
  SAGE NlaIII
(1)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(101)		   Tiling Array
(0)		   cDNA Array
(10)		   Oligo Array
(37)		   Bead Array
(12)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(1)		   HT-Seq
(41)		   Other
(2)		   All
(205)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Great Ape Copy Number Variation (GSE30559) [Oligo Array] NimbleGen/UWash Human 385K Design 2 (GPL7749) University Pompeu Fabra 2011-07-11 Pan paniscus
Pan paniscus		 22,331,566
(385,027 x 58) 		58 by_platform
by_series
2 Structural variation of the gorilla genome (GSE27072) [Oligo Array] UW/NimbleGen_humangorilla_custom_dupsdels (GPL11674) University of Washington 2011-02-04 Pan troglodytes,Gorilla gorilla
Pan troglodytes,Gorilla gorilla		 10,486,915
(2,097,383 x 5) 		5 by_platform
by_series
3 INTER_specific hybs: A Burst of Segmental Duplications in the African Great Ape Ancestor (GSE13884) [Oligo Array] NimbleGen/UWash Human 385K Design 1 (GPL7748) University of Washington 2008-12-09 Pongo abelii,Gorilla gorilla
Pongo abelii,Gorilla gorilla		 7,705,660
(385,283 x 20) 		20 by_platform
by_series
4 Early and sustained innate immune response defines pathology and death in nonhuman primates infected by highly pathogenic influenza virus. (GSE33351) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) (GPL9861) University of Washington 2011-10-31 Macaca fascicularis
Macaca fascicularis		 3,255,840
(45,220 x 72) 		72 by_platform
by_series
5 A Burst of Segmental Duplications in the African Great Ape Ancestor (GSE13934) [Oligo Array] NimbleGen/UWash Human 385K Design 2 (GPL7749) University of Washington 2008-12-12 Pan troglodytes
Pan troglodytes		 2,695,189
(385,027 x 7) 		7 by_platform
by_series
6 Long-Term Programming of Antigen-Specific Immunity from Gene Expression Signatures in the PBMC of Rhesus Macaques Immunized with an SIV DNA Vaccine (GSE35816) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-02-14 Macaca mulatta
Macaca mulatta		 2,676,696
(20,278 x 132) 		132 by_platform
by_series
7 Aged animals generate a robust immune response against swine origin 2009 pandemic H1N1 influenza A virus (GSE38502) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-06-05 Macaca mulatta
Macaca mulatta		 1,601,962
(20,278 x 79) 		79 by_platform
by_series
8 INTRA_specific hybs: A Burst of Segmental Duplications in the African Great Ape Ancestor (GSE13885) [Oligo Array] NimbleGen/UWash Human 385K Design 2 (GPL7749) University of Washington 2008-12-09 Pan troglodytes
Pan troglodytes		 1,540,108
(385,027 x 4) 		4 by_platform
by_series
9 Pandemic Swine-Origin H1N1 Influenza A Virus Isolates Show Heterogeneous Virulence in Macaques (GSE31694) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) (GPL9861) University of Washington 2011-08-26 Macaca fascicularis
Macaca fascicularis		 406,980
(45,220 x 9) 		9 by_platform
by_series
10 Integrated Clinical, Pathologic, Virologic, and Transcriptomic Analysis of H5N1 Influenza Virus-Induced Viral Pneumonia in the Rhesus Macaque (GSE37149) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-04-10 Macaca mulatta
Macaca mulatta		 283,892
(20,278 x 14) 		14 by_platform
by_series
11 Comparative transcriptomic analysis of acute host responses during 2009 pandemic H1N1 influenza infection in mouse, macaque, and swine (macaque dataset) (GSE40088) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-08-13 Macaca fascicularis
Macaca fascicularis		 121,668
(20,278 x 6) 		6 by_platform
by_series
12 Comparative transcriptomic analysis of acute host responses during 2009 pandemic H1N1 influenza infection in mouse, macaque, and swine (GSE40092) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-08-13 Macaca fascicularis
Macaca fascicularis		 121,668
(20,278 x 6) 		6 by_platform
by_series
13 Macaca Fascicularis Differential Gene Expression Following Stroke: Control versus Tat-NR2B9c Treated Cortex at 1 hour and 6 hours following middle cerebral aretry occlusion (MCAO) (GSE35589) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) (GPL9861) University of Toronto 2012-02-07 Macaca fascicularis,Macaca mulatta
Macaca fascicularis,Macaca mulatta		 1,085,280
(45,220 x 24) 		24 by_platform
by_series
14 Identification and Comparative Analyses of Myocardial miRNAs Involved in Fetal Response to Maternal Obesity (GSE43323) [Oligo Array] LC Sciences Papio hamadryas miRNA array [UT_D110128 reporter name] (GPL16458) University of Texas Health Science Center 2013-01-07 Papio hamadryas
Papio hamadryas		 36,432
(3,312 x 11) 		11 by_platform
by_series
15 Gene expression signatures differ with extent of atherosclerosis in monkey iliac artery (GSE26326) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLink Human Whole Genome Bioarray (GPL2895) University of South Dakota 2010-12-28 Macaca fascicularis
Macaca fascicularis		 677,376
(56,448 x 12) 		12 by_platform
by_series
16 The microRNAs hsa-miR-342 and -494 are upregulated in the brain of BSE-infected macaques (GSE12651) [Oligo Array] University of Goettingen Ambion miRNA array version 1 (GPL7206) Universitaetsmedizin Goettingen 2008-09-03 Macaca mulatta
Macaca mulatta		 4,320
(480 x 9) 		3 6 by_platform
by_series
17 Gene expression profiling in the Cynomolgus macaque Macca fascicularis shows variation within the normal birth range. (GSE32069) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) United Arab Emirates University 2011-09-12 Macaca fascicularis
Macaca fascicularis		 446,116
(20,278 x 22) 		8 8 6 by_platform
by_series
18 DNA methylation programming and reprogramming in primate embryonic stem cells (GSE17981) [Oligo Array] NimbleGen_Rhesus macaque_38K_DNA methylation array (GPL9155) The Weizmann Institute 2009-09-04 Macaca mulatta
Macaca mulatta		 4,620,780
(385,065 x 12) 		3 9 by_platform
by_series
19 Changes in polysome loading as a consequence of RHA downregulation [Agilent] (GSE23669) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) The Ohio State University 2010-08-17 Chlorocebus aethiops
Chlorocebus aethiops		 135,660
(45,220 x 3) 		3 by_platform
by_series
20 In utero and lactational exposure to TCDD induces disruption of prostate glands and fibrosis in rhesus monkeys (GSE20043) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) (GPL9861) Shin Nippon Biomedical Laboratories, Ltd. 2010-01-26 Macaca mulatta
Macaca mulatta		 406,980
(45,220 x 9) 		9 by_platform
by_series
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