Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(97)
  Tiling Array
(0)
  cDNA Array
(10)
  Oligo Array
(37)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(39)
  Other
(0)
  All
(199)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 Great Ape Copy Number Variation (GSE30559) [Oligo Array] NimbleGen/UWash Human 385K Design 2 (GPL7749) University Pompeu Fabra 2011-07-11 Pan paniscus
Pan paniscus
22,331,566
(385,027 x 58)
58 by_platform
by_series
2 Rhesus macaque aCGH (GSE19881) [Oligo Array] Agilent-022770 Macaca mulatta 951K rheMac2 TargetedRegionsRSmith (GPL9903) Brigham and Women's Hospital 2010-01-13 Macaca mulatta
Macaca mulatta
16,558,272
(974,016 x 17)
17 by_platform
by_series
3 Transcriptional architecture of the primate neocortex (GSE31613) [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) Allen Institute for Brain Science 2011-08-23 Macaca mulatta
Macaca mulatta
13,321,980
(52,865 x 252)
249 3 by_platform
by_series
4 Identification of brain transcriptional variability reproduced in peripheral blood: an approach for mapping brain eQTLs (GSE15301) [Bead Array] Illumina humanRef-8 v2.0 expression beadchip (GPL6104) UCLA Center for Neurobehavioral Genetics 2009-03-19 Chlorocebus sabaeus
Chlorocebus sabaeus
10,870,650
(22,185 x 490)
48 395 47 by_platform
by_series
5 Structural variation of the gorilla genome (GSE27072) [Oligo Array] UW/NimbleGen_humangorilla_custom_dupsdels (GPL11674) University of Washington 2011-02-04 Pan troglodytes,Gorilla gorilla
Pan troglodytes,Gorilla gorilla
10,486,915
(2,097,383 x 5)
5 by_platform
by_series
6 Interactome analysis of longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus (GSE20262) [GeneChip] [HG-U133A] Affymetrix Human Genome U133A Array (GPL96) NIH 2010-02-10 Macaca fascicularis
Macaca fascicularis
8,021,880
(22,283 x 360)
360 by_platform
by_series
7 INTER_specific hybs: A Burst of Segmental Duplications in the African Great Ape Ancestor (GSE13884) [Oligo Array] NimbleGen/UWash Human 385K Design 1 (GPL7748) University of Washington 2008-12-09 Pongo abelii,Gorilla gorilla
Pongo abelii,Gorilla gorilla
7,705,660
(385,283 x 20)
20 by_platform
by_series
8 Dramatic effects of social behavior on gene regulation in rhesus macaques (GSE34129) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) University of Chcago 2011-12-03 Macaca mulatta
Macaca mulatta
5,667,720
(47,231 x 120)
20 100 by_platform
by_series
9 Microarray Expression Analysis of SIV infection of Sooty Mangabeys (GSE16147) [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) University of Pennsylvania 2009-05-18 Cercocebus torquatus atys
Cercocebus torquatus atys
4,969,310
(52,865 x 94)
94 by_platform
by_series
10 VIPR HMM: A hidden Markov model for detecting recombination with microbial detection arrays (GSE34490) [cDNA Array] Recombination Detection Microarray Release I (R1.1Tiled) (GPL15022) Washington University in St. Louis, School of Medicine 2011-12-16 Chlorocebus aethiops
Chlorocebus aethiops
4,949,196
(43,414 x 114)
114 by_platform
by_series
11 Dramatic effects of social behavior on gene regulation in rhesus macaques [Individual_expression] (GSE33090) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) University of Chcago 2011-10-19 Macaca mulatta
Macaca mulatta
4,723,100
(47,231 x 100)
100 by_platform
by_series
12 DNA methylation programming and reprogramming in primate embryonic stem cells (GSE17981) [Oligo Array] NimbleGen_Rhesus macaque_38K_DNA methylation array (GPL9155) The Weizmann Institute 2009-09-04 Macaca mulatta
Macaca mulatta
4,620,780
(385,065 x 12)
3 9 by_platform
by_series
13 Regulation of gene expression in the postnatally developing monkey hippocampal formation (GSE32590) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) University of Fribourg 2011-10-04 Macaca mulatta
Macaca mulatta
4,374,000
(54,675 x 80)
80 by_platform
by_series
14 Analysis of CNVs in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies (GSE9220) [Oligo Array] Nimblegen Macaque Whole genome CGH 385K array (GPL5949) Harvard Medical School 2007-10-03 Macaca mulatta
Macaca mulatta
4,235,011
(385,001 x 11)
11 by_platform
by_series
15 Transcriptional profiles of sorted CD8+ and CD4+ memory T cells from CP and NP and unvaccinated control RM 7 days prior to, and 4 and 14 days after wt SIVmac239 challenge by microarray analysis. (GSE39968) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Vaccine and Gene Therapy Institute 2012-08-08 Macaca mulatta
Macaca mulatta
3,778,480
(47,231 x 80)
80 by_platform
by_series
16 Lymph node T cell responses predict the efficacy of live attenuated SIV vaccines (GSE40006) [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) Vaccine & Gene Therapy Institute of Florida 2012-08-09 Macaca mulatta
Macaca mulatta
3,778,480
(47,231 x 80)
80 by_platform
by_series
17 Early and sustained innate immune response defines pathology and death in nonhuman primates infected by highly pathogenic influenza virus. (GSE33351) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) (GPL9861) University of Washington 2011-10-31 Macaca fascicularis
Macaca fascicularis
3,255,840
(45,220 x 72)
72 by_platform
by_series
18 Transcriptional profiling of experimental CD8+ lymphocyte depletion in rhesus macaques infected with SIVmac239 (GSE37834) [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) Yerkes National Primate Research Center 2012-05-08 Macaca mulatta
Macaca mulatta
3,171,900
(52,865 x 60)
60 by_platform
by_series
19 A Burst of Segmental Duplications in the African Great Ape Ancestor (GSE13934) [Oligo Array] NimbleGen/UWash Human 385K Design 2 (GPL7749) University of Washington 2008-12-12 Pan troglodytes
Pan troglodytes
2,695,189
(385,027 x 7)
7 by_platform
by_series
20 Long-Term Programming of Antigen-Specific Immunity from Gene Expression Signatures in the PBMC of Rhesus Macaques Immunized with an SIV DNA Vaccine (GSE35816) [Oligo Array] Agilent-015421 Rhesus Macaque Gene Expression Microarray (Probe Name Version) (GPL14569) University of Washington 2012-02-14 Macaca mulatta
Macaca mulatta
2,676,696
(20,278 x 132)
132 by_platform
by_series
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