Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(102)		   Primates
(4)		   Rodents
(40)		   Mammals
(13)		   Vertebrates
(33)		   Invertebrates
(30)		   Plants
(75)		   Bacteria
(73)		   Viruses
(4)		   Phages
(0)		   Unclassified
(18)		   All
(392)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(0)		   Tiling Array
(0)		   cDNA Array
(0)		   Oligo Array
(4)		   Bead Array
(0)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(0)		   Other
(0)		   All
(4)		  
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GPL9903 Agilent-022770 Macaca mulatta 951K rheMac2 TargetedRegionsRSmith 974,016 Brigham and Women's Hospital 2010-01-13 Agilent Technologies Macaca mulatta
Macaca mulatta		 Oligo Array in situ oligonucleotide, Agilent-022770 Macaca mulatta 951K rheMac2 TargetedRegionsRSmith, Targeted Regions with large backbone Arrays of this design have barcodes that begin with 16022770 or 2522770. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
2 GPL9861 Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version) 45,220 Agilent Technologies 2010-01-07 Agilent Technologies Macaca mulatta
Macaca mulatta		 Oligo Array in situ oligonucleotide, Agilent-015421 Rhesus Macaque Gene Expression Microarray (Feature Number version), M. mulatta (Rhesus) Oligo Microarray 4x44K Arrays of this design have barcodes that begin with 16015421 or 2515421. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL14569.
3 GPL10158 Agilent-024419 SurePrint G3 Rhesus Macaque CGH Microarray 4x180K (Feature Number version) 180,880 Agilent Technologies 2010-03-09 Agilent Technologies Macaca mulatta
Macaca mulatta		 Oligo Array in situ oligonucleotide, Agilent-024419 SurePrint G3 Rhesus Macaque CGH Microarray 4x180K (Feature Number version), SurePrint G3 Rhesus Macaque CGH Microarray 4x180K Arrays of this design have barcodes that begin with 16024419 or 2524419. Data table annotations based on build rheMac2:Mmul_051212:Jan2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
4 GPL10157 Agilent-024422 SurePrint G3 Chimpanzee CGH Microarray 4x180K (Feature Number version) 180,880 Agilent Technologies 2010-03-09 Agilent Technologies Pan troglodytes
Pan troglodytes		 Oligo Array in situ oligonucleotide, Agilent-024422 SurePrint G3 Chimpanzee CGH Microarray 4x180K (Feature Number version), SurePrint G3 Chimpanzee CGH Microarray 4x180K Arrays of this design have barcodes that begin with 16024422 or 2524422. Data table annotations based on build panTro2:GSCv2.1:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
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