Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(5)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(2,656)		   Tiling Array
(0)		   cDNA Array
(154)		   Oligo Array
(879)		   Bead Array
(909)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(12)		   HT-Seq
(286)		   Other
(168)		   All
(5,069)		  
  brain
(1,034)		   blood
(1,407)		   connective
(100)		   reproductive
(105)		   muscular
(94)		   digestive
(167)		   liver
(246)		   lung
(143)		   urinary
(69)		   endo/exo-crine
(32)		   embryo
(102)		   adult aerial structure
(0)		   young aerial structure
(0)		   root
(0)		   meristem/growing tissue
(0)		   flower/sexual organ
(0)		   seed/fruit/grain
(0)		   pooled
(258)		   unclassified
(1,312)		   all
(5,069)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
1 GSM1035966 ARV+PP (5937290092_B) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
2 GSM1035967 ARV+PP (5937290092_C) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
3 GSM1035968 ARV+PP (5937290092_D) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
4 GSM1035969 ARV+PP (5937290092_E) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
5 GSM1035970 ARV ALONE (5937290092_F) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
6 GSM1035971 ARV ALONE (5937290092_G) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
7 GSM1035972 ARV ALONE (5937290092_H) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
8 GSM1035973 ARV ALONE (5937302028_L) 47,231 Vaccine and Gene Therapy Institute 2012-11-13 [Bead Array] Illumina HumanHT-12 V4.0 expression beadchip (GPL10558) RNA Macaca nemestrina
Macaca nemestrina		 colon CD45+ LIVE COLON
9 GSM1020694 rhesus_a_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta		 colon rhesus_colon
10 GSM1020703 rhesus_b_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta		 colon rhesus_colon
11 GSM1020712 rhesus_c_colon 0 MIT 2012-10-17 [HT Sequencing] Illumina HiSeq 2000 (Macaca mulatta) (GPL14954) SRA Macaca mulatta
Macaca mulatta		 colon rhesus_colon
12 GSM915824 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P019 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P019, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
13 GSM915825 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P016 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P016, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
14 GSM915826 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P014 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P014, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
15 GSM915827 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P009 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P009, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
16 GSM915828 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal M890 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal M890, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
17 GSM915829 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal M898 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal M898, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
18 GSM915830 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P008 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P008, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
19 GSM915831 Rectal mucosal biopsy_+ALVAC vaccine/gp120 boost_LOW DOSE CHALLENGE (TCID50=470)_Animal P001 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P001, Rectal mucosal biopsy, +ALVAC vaccine/gp120 boost, LOW DOSE CHALLENGE (TCID50=470)
20 GSM915832 Rectal mucosal biopsy_CONTROL_LOW DOSE CHALLENGE (TCID50=470)_Animal P059 52,865 Yerkes National Primate Research Center 2012-04-16 [GeneChip] [Rhesus] Affymetrix Rhesus Macaque Genome Array (GPL3535) RNA Macaca mulatta
Macaca mulatta		 colon Animal P059, Rectal mucosal biopsy, CONTROL , LOW DOSE CHALLENGE (TCID50=470)
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